Xiphophorus couchianus (Monterrey platyfish): 114152954
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Entry
114152954 CDS
T05908
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114152954 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114152954 (tubgcp6)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
114152954 (tubgcp6)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
114152954 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
114152954
NCBI-ProteinID:
XP_027886945
LinkDB
All DBs
Position
2:complement(26333111..26360977)
Genome browser
AA seq
1791 aa
AA seq
DB search
MYSRSNNPTKANSSSSITELLSVLCDRSLSGVSWKRRALGGVSREGFHRALKKRAYGALL
SKLFQDGTKGSASRPSAAARTPPRNKVLMMCFDLRVAGCREEAEALEDRLGRLREGASSG
LKEVDSVLELLVCLAGSAPPPPTSFSRDYMRRERAVLRKPQPWSYQSEELQRLEARAWGL
VCAEEWGTLETLCVTQRLMDSLPRTGLLALNTKVEAEERFEKETRLSLFGALQHTRTSDM
DIRLDLPPIPSNIDVTGLAIRVPHYLDQSEDEGFQSASNLTPDSQSEASPVPDVDIWEAV
RTFEPRRRRCWESVGCPPGNRESFYLTEGGRETFDQLYRLWEGEMRVVSSSDSSPILILP
LDSQMQLVSDLLNVLIGVASTTFPLNQSVQFDVRPGVCVSGASPESVSRLLGELAQYGTH
YLRLSRFCLQSGDKKGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFLFRKVGRQL
RYLSELCCVDGLSGSGQAAFPVGVKLLSYLYNEAQSNCSNENYPILLSLLKSCCEPYTRF
VYDWVYSGVFRDVCGEFMIQVNEDYLSFRDKHFWVQGYTLISMDVEDCVPVFLRQFANDV
YVCGKTINLLRICCPQHYICWSELPVPRIAVTFSLQEVEEIERECAVYRSRMERIAKHSA
VSREEQALRAERSRQELINQVRESAAKTLESIRGRQVSQRLAEEAKKRERFEELKQHLEQ
EQEWRNAAKKKQEDDDFGFARELRDREKRLQALEEQLEQRARKELIAQYSRLSEEAARRE
RRAMWRVQRMRLHEAREQFLMLDGQKIQVLLDKYPFGQESPPVAALPSGPSLTPQQTHEF
PTQEEQLADIRRSEAASPPLNPSAADPPRISEDSDISDLLTKSLKPDSQQVDNALEEIGS
DLPDAHPALQLVDYDFSAPFSPLEGIAGQSSSQSRPRWGPAVQPELMQHSEASSSGTDQG
QNEAVPEQEASDEQKKDQTKTEGVDADTKDQDSESGDAPGGGVSLPGPQRSLSIANIKVP
DRGSHGHPSDAHIKVGQNVSEVTAHIPSPNIHGHASDSHIKVGEHVSEVDAPTPSSGAHG
HSSDAHIKIGEYVPECVLPLPVRNIHGHVSHAHIKVGEYVSEIEAPLPSPSVHGHSSDAH
IKVGENVSDVVAPRPERSVHGHSSDAHIKVGENVSDVVAPRPAPSVHGHSSDANIRVGEF
VSDVAEGRPRWSKHGHSSDCVLQPGCVVSGEELPSAPLPGSSYGHSSDSALGIGCVVQGE
EPKRAALPGSAHGHSSDSSLGIGCVVSKSDPLPSPLPGSAYGHSSDSTLGIGCVVQGSEP
PPAALPGSSYGHSSDSALGVGCVVKGKEDQNLQKTKDKEDKVSPSGSPTDDRMVCWTTGL
WLSPGEKSQQEYLMALSAQYQVEHYEDCYNLLASSPESQLLKQVTRGPWGLPVDPTLRRA
TDTTAVQLSEMVSLPVLIKHSVTAPLITHVSLVNKAIVDYFFVELGVERHFEALRHFLLM
EDGEFAQSLSDLIFEKMASGQTPGELLTPLVLNSILSKALQYSLHGDTPLAPNFTFALRF
LPETFHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNRLFSFLLQLKHMVWSLRDVWF
HLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIANQILQVSWTEFTAKLATAGDL
DGIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILKFRAQLIAQPWDSQQGEAVHP
SFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYKDS
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgagatcaaacaatcccacaaaggccaactccagcagcagcatcacagagctc
ctgagcgttctgtgtgaccgcagcctctctggggtctcttggaagcgtcgagccctcgga
ggagtttccagagagggcttccaccgagcccttaaaaagcgggcctacggcgccttgctg
tctaagctttttcaagatggcaccaaagggtctgcctcgagacccagtgccgcagccaga
actccacccaggaacaaagtcctgatgatgtgctttgacttgcgagtggccggctgccgg
gaagaagcggaggcgctggaggatcggctggggaggctgcgtgaaggagcgtcctccggt
ctgaaagaagtagactccgtcctggagctcctagtgtgcctcgccggctccgcgccgccg
cctcccacctcgttcagcagggactacatgagacgagagagggccgtgctgcggaagccg
caaccctggagctaccagagcgaggagctgcagaggctggaggccagggcgtggggtctg
gtgtgtgcggaggagtgggggacgctggagactctgtgtgtaactcagaggctgatggac
tccctgccaaggacagggttgctggctttgaacacgaaagtggaagcagaagagagattt
gagaaggagacgcggctgtcgttgtttggggcgctgcagcacactcgaacatcagatatg
gacatcagactggacctcccgcctattcccagtaatatcgatgttactggactggctatc
agggttcctcactacttggatcagtctgaagacgagggcttccagtcagcctccaacctg
accccagactctcagtcagaggcgagccccgttccagatgttgacatctgggaggctgtc
cgcacgtttgagcccagaagacgccgctgctgggagtctgttggctgtccaccaggaaac
agggagtccttctatctgacagagggaggcagagagacgtttgaccagctctatcggctg
tgggagggagagatgagggtcgtgagctccagcgactcctctcccatcctcatcctgccc
ctggactcccagatgcaattagtgtccgacctcctgaatgttctgataggagtggcgtcc
actaccttccctctcaaccagagcgttcagtttgacgtcaggcctggcgtgtgcgtgtcg
ggagcttctccagagagcgtgtctcgtcttctgggagagttggcccagtatggcacccac
tacctgaggctgagtcgcttttgtctccagagtggtgacaagaagggcctagtcttccag
gcgttcaccggtggtctgaggaagtatctgcattactacagagcgtgcgttctcagcact
ccccccactctcagcctgttgaccatcggcttccttttccgcaaagtgggccgccagctc
aggtacctgtcggagctgtgctgtgtggacggactgtcgggctcaggccaggctgccttc
cctgtgggtgttaagctgctgtcctacctctacaacgaagcccagagtaactgcagcaat
gagaactatcccatcctgctgtccctgttgaagagctgctgtgaaccttacacacggttc
gtgtacgactgggtgtacagcggcgtgtttcgagacgtttgtggagaattcatgatccag
gtcaacgaggactacctcagtttcagggacaaacacttctgggttcaaggctacactctg
atctcgatggatgtggaggactgtgtgccagtcttcctgagacaatttgccaacgacgtc
tatgtctgtgggaagaccataaaccttctccgaatctgctgtccacagcactacatctgc
tggtcggagctgccggtgcctcgcatcgccgtcaccttctccctgcaggaggtggaggag
attgagcgggaatgcgcggtgtatcgcagccgcatggagaggatcgcgaaacacagcgcc
gtcagcagggaggagcaggccctgcgagcagagcgatcgcgccaggagctgatcaatcag
gtcagggagtcggcggctaaaaccctggagagcatccgagggcgccaggtgtcgcagcgt
ctagctgaggaggccaagaaaagggaacgctttgaggagctgaagcagcacctggaacag
gagcaggagtggcgaaatgcagccaagaagaagcaggaggacgacgactttggctttgcc
agagagctgagagacagagaaaagagactgcaagccctggaggagcagctggagcagaga
gccagaaaggagctgattgctcagtacagccgtctgtcggaggaagcggctcgcagagag
agacgggccatgtggagagtgcagcgaatgagactccacgaagccagggaacagttcctc
atgctcgatgggcagaaaattcaggtattgctggataaatacccctttggccaggagagc
cctcctgtggctgcattgccatctggtccttcattaacgccacaacaaactcacgaattt
cccactcaggaggagcagttagcagacattcgaagatcagaagctgcatccccgccactt
aatccgtcggcagcagaccctcctcgcatctcggaggactctgacatcagtgaccttctc
actaaatcgctgaagcctgacagtcagcaagtggataacgccttggaggagattggctct
gacctacctgatgcccatcctgctctgcaactcgttgactatgactttagtgcccccttt
agcccactcgagggtatcgccggccagtcttcttctcagtccaggcctcggtggggacct
gcagtccagcctgagttgatgcagcactcggaagcttccagctcgggtacagaccagggt
cagaatgaggctgtacctgaacaagaggcaagtgatgagcagaaaaaagatcaaactaag
actgagggagttgatgcagacactaaagaccaagactcagagagtggagatgcacctggt
ggaggtgtttctctcccaggccctcagcgttctctctccattgctaacataaaggttcca
gacagaggctctcatggccatccatctgatgctcatataaaggttggacagaatgtctct
gaggtaactgctcacatcccctcccccaacattcatggccatgcttcagactcgcacatc
aaggtgggagaacacgtgtctgaagttgacgctcccacaccgtcctctggtgctcacggc
cactcctctgacgctcacatcaaaatcggggaatatgttcctgagtgtgtccttcctctt
cctgtccgtaacatccacggtcatgtctcgcatgcccacatcaaggttggcgaatatgtt
tccgaaatagaggcgccgttaccgtcgccgagcgttcatggccacagctctgacgctcat
ataaaggtcggggaaaatgtttcagatgttgtggcgccgcggcctgagcgtagcgttcac
ggccacagctctgacgctcatataaaggtcggggaaaatgtttcagatgttgtggcgccg
cggcctgcacccagtgttcacggacattcctctgacgccaatataagagtgggggagttt
gtgtctgatgtagcagaaggaagacctcgttggagtaaacacgggcactcctcggattgt
gtcctccagccaggttgtgtggtctctggagaagaactcccatcagcccctctgcctggc
agctcttacggtcactcctcggactcagctttaggtatcgggtgtgtggtccagggagag
gagcccaaacgagcagcgttacctggcagcgcccacggacattcgtcagactcttctttg
ggtatcggatgcgtcgtctcaaaatccgaccctcttccatcgccactaccaggcagcgcc
tacggtcactcctctgattcaacactgggcatcggctgcgtggtccaggggtcagagccg
ccgcccgctgcacttccaggcagctcatatggtcactcatcagactctgctctaggggtt
ggatgtgtagtgaaaggaaaagaagatcaaaacctgcaaaagacaaaggacaaggaagat
aaagtttctccttcaggcagccccaccgatgacaggatggtgtgttggacgactggtttg
tggttatcccctggagagaagtcccagcaggaatacctcatggccctgtccgctcagtac
caggtggaacactacgaggactgctacaacttactagcttcgtcccctgagtcccagctg
ctgaagcaggtaacgcgggggccctggggtcttcctgtggacccgacgctccgcagagcc
acagacaccacagctgtccagctcagcgagatggtttccctgccggtgctgataaagcac
tctgtcaccgccccgctcatcacgcatgtctccttggtgaataaggctatcgtggactac
ttctttgtggagctgggggtggaaagacactttgaggcgcttcgccacttcctgctgatg
gaggatggcgagttcgcccagtctctcagcgatctgatctttgaaaagatggccagcggc
cagactccgggcgagctgctgaccccgctggtcctgaattccatcctcagtaaggccctg
cagtacagcctccacggagacactcccttagctcctaatttcaccttcgccctgcgcttc
ctgcccgaaaccttccatccccacgccccggactccctcaactgcttggagctgcgctac
aaggtggactggccgttgaacatcatcatcaccgacagctgcatgaacaagtacaaccgc
ttgttttcgttcctgctgcagctcaaacacatggtgtggagcctcagggatgtctggttt
cacctcaagaggacagcactggtgaaaggcgcgggccgctcggtgcagttccgtcaactg
cagctctacaggcacgagatgcagcattttgtcaaagtcattcagggttacatcgccaac
cagatcctgcaggtgtcctggactgagttcacggcgaagctggccaccgccggtgacctg
gacggcatccaccgcacacacgctgactacctcaacagagccatctttaggggtctgctg
acggagaaagcagctccggtcatgaacatcatccacagcattttcagcctgatcctcaaa
tttcgggctcagctcatcgcacaaccctgggacagtcagcagggggaggcagtgcacccg
agcttcattgctatgcagcagtcgtacaacacttttaagtattactcccacttccttttc
aaagtggtgactaaactggtgaaccgaggctatcagccccatttagaggatttcctgctt
cgcatcaacttcaacaactactacaaggactcttaa
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integrated database retrieval system
