Xiphophorus couchianus (Monterrey platyfish): 114152972
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Entry
114152972 CDS
T05908
Symbol
supt20h
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114152972 (supt20h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114152972 (supt20h)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114152972 (supt20h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
114152972
NCBI-ProteinID:
XP_027886962
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Position
11:28901972..28920582
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AA seq
871 aa
AA seq
DB search
MQPQRQGVNGHSRKVTVWGRKDSIVNCHSPCSWQWTTMQQVLEYALDRAEYIVESARQRP
AKRRISSSGRKSLYQKLHELYIEECEKEPELKNLRRNVNLLEKLVSQESVSCLVVNLYPG
NEGYSLMLRGKNGSGKTNSETIRLPYEERELLEYLDAEELPPILVDLLEKSQVNIFHCGC
VIVEVRDYRQAGNTKIPTYQSRHILLRPTMQTLICDVHAMTSDHHKWTQDDKLQLESQLI
LATAEPLCLDPSISVTCTANRLLYNKQKMNTRSMKRCFKRHSRAALNRQQELSHLPVPPQ
LRLYDYLQKRKERKPAPVIDLKISKVGNCVDMWKQNNCQLTVPKEIDVEKYAVVEKSLQL
GDAQTTVIWPAEEVIDDYTFECEVGGQAQRTKVSIFQSMGDPLVYGKIYSAKETKAEEDS
PDLKLIHPTFLIGSKIDAERFLTQYKGVYEKDVKCEVRMSHNSGNVGQGPLSPSKDEGDG
ISPLVQTSVLGKGVKHRPPPIKLPSGSGSSSSGNPYSSQTTSGLLKCPTPPPPAKSQTLN
RKHSMELGQVGLLSPASLSPMGSTQRSGTPKPSTPTPTNTPCSTPHPTDALSTPLSVTPT
PSDPAMVQSQSQAPLLTPFAQQQLALSQPLPVMSIPLPTMGTSITTGSTSSQVMANPGLN
FINVVSSVCSPQTLMSGSNPMLGPGLNLSGILPPAGLMSTMQSGAQTGSPFGLNNSAGLR
PLNLLQIPPGPYILNSLQQQQLSQFSPQQSQSATSSPQQQGEMSDQGSDQSLGNQQTAVI
NLGVGSFMSPQTAVLSQLGCGLDGSGPPLPSPRLQQQHQPQIQLQFLQHQMQQQQMAMGA
AVPQVGAPRQHTGSQPRSKRKRSTPQPLPKS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctcaaaggcaaggtgtgaatggtcactctaggaaggtgacagtgtggggcaga
aaggacagcatcgtaaactgtcactcgccttgcagctggcagtggaccacaatgcaacaa
gttctggaatatgcattggatcgagccgagtacattgtggaaagtgctcgacagcgacca
gccaaaagaagaatctcatccagcggcaggaagagtttgtatcagaagctccatgagctc
tatattgaagaatgtgaaaaagaaccagagttaaagaatctgagaagaaatgtgaatcta
ctagaaaagctggtgtctcaggagtctgtatcgtgtctggtggtcaacctgtaccctggg
aatgaaggctattcgctaatgctcaggggcaaaaatggatccggtaaaactaactctgaa
accatccgtctcccatatgaagaaagagagcttctggagtacctggatgcggaggagttg
cctcccattctggtggatctgttggagaaatcacaggtgaacatcttccactgtggctgt
gtaatagtcgaggtgagagactacaggcaagctggtaatacaaagatccccacctatcag
agcaggcacattcttctgcggccaaccatgcagactctaatctgtgacgtgcatgccatg
accagtgaccaccacaagtggacacaggatgataaattgcagctggagagtcagttgatt
ttggccacagctgaacctctgtgcctggatccttccatttctgttacttgcacagccaac
cgtctgctctacaacaaacagaaaatgaacactcgctcgatgaaacggtgttttaagagg
cactcccgggctgctttgaacaggcagcaggaactatctcatctgcccgtgccaccacag
ctacgactctacgactaccttcagaagaggaaggaaaggaaacctgctcctgtcatagac
ttaaaaatctcaaaggttggaaattgtgtcgacatgtggaagcagaacaactgccagcta
acagtaccgaaggagattgatgttgaaaagtatgccgtggttgagaaatcgttgcagttg
ggagacgctcaaaccactgtgatctggcctgctgaagaagttatagatgactacacattt
gaatgtgaagtgggcggccaagctcagagaaccaaggtgtccatcttccagtcgatgggg
gacccgctggtttatgggaagatctactctgctaaagaaacaaaagcagaggaggacagc
ccagatttaaagcttatacatccgactttcctcatagggtcaaagatcgatgcagaaagg
tttcttacccagtacaaaggagtctatgagaaagatgtgaagtgtgaggtcaggatgtcc
cataactcaggcaacgtgggacaggggcctctgtcccccagcaaagatgagggtgatggt
atttctcctcttgtacagacgtctgtgttaggaaaaggggtgaagcatcgaccccctccc
ataaaactgccttcaggatcgggcagcagctcctcaggtaatccgtatagttcgcaaacc
acgagtggtttactaaagtgtcctacgccgccacctccagccaaaagccagactctgaac
aggaagcactccatggagctgggccaggtgggcctgctgtcacctgcctccctctctccg
atgggctccacgcagagatcgggaacccctaagccttctactcccacacccaccaacaca
ccatgctcaacccctcaccctaccgatgcgctctccacgcccctctcagtgacccctacc
ccctcggatcctgccatggttcagagccagtcacaagctcccctgcttacacctttcgcc
cagcaacaactggctcttagccagcctctacctgtcatgtccatccctcttcccaccatg
gggacatcgatcaccacaggatccacctcttcacaagttatggcaaacccagggctcaac
ttcataaacgtggtcagctctgtctgcagtccccagactttaatgagtggctccaaccca
atgctgggtccaggtcttaatttgagtggaatcctgccacctgcagggttgatgtccacc
atgcagtccggtgcccagactgggagtccttttggtctgaacaacagtgctggactgaga
ccgctgaacctgttacagatcccccctggtccttacatccttaactctctgcagcagcag
cagctgtcccagttctccccacagcagagtcagtcagctacgtccagtcctcaacagcag
ggggagatgagcgaccaaggatccgatcagagtttaggaaaccagcagacggctgtcatc
aatctcggggttggaagcttcatgtctccacagacagcagtgctgtcccagttgggctgt
gggctggacgggtctgggcccccgctgccttctccaaggcttcagcagcagcaccagcca
cagattcaattgcaattcttgcagcaccaaatgcagcagcagcaaatggctatgggagca
gcggttcctcaggtgggagcgccacggcaacataccggcagtcagccaagaagtaagagg
aagaggagcacgccacagcccctcccaaagtcatag
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