Xiphophorus couchianus (Monterrey platyfish): 114152996
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Entry
114152996 CDS
T05908
Name
(RefSeq) junctional adhesion molecule A-like isoform X1
KO
K06089
junctional adhesion molecule 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecule (CAM) interaction
xco04517
IgSF CAM signaling
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114152996
04517 IgSF CAM signaling
114152996
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114152996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114152996
04090 CD molecules [BR:
xco04090
]
114152996
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
CTX family
114152996
CD molecules [BR:
xco04090
]
Proteins
114152996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
V-set
I-set
ig
VEGFR1-3_N_Ig-like
Ig_6
Pectate_lyase_4
C2-set_2
CYYR1
Motif
Other DBs
NCBI-GeneID:
114152996
NCBI-ProteinID:
XP_027887002
LinkDB
All DBs
Position
11:complement(19399075..19408049)
Genome browser
AA seq
300 aa
AA seq
DB search
MGRLVSLLLFMCAATGGSSFDVTTSPPTLRVKENEGVDMSCSYTADFGADVRMEWRFVNS
KGSTHYVLFDKKITEPYANRVNIFSSTNLRFSKVTRQDNGEYFCDVSSSSSPTKNSKVAL
TVLVPPSVPKCGIPQTVTTNAYVALTCHDPDSSPPPTYNWYKGTTLLPADPSKNVAFKNA
TYKLDSKTGMLVFPSVTKMDTGEYYCEVSNDAGPSQSCKSVKMEVRDINTGGIVAGVIFG
LLFLGLLIGGLWYANKKGYLPLKSESNKQQNAAYQPPSMYAGGGGEEDNGEFKQKSSFVV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcctcgtttcgctgcttttgtttatgtgcgccgcgacaggtggaagcagtttt
gatgtcacaacttcacctccaactctgagagtaaaagaaaatgaaggtgtggacatgtca
tgctcctacacagcagacttcggtgcagatgtcaggatggagtggagattcgtaaactca
aaaggctcaacacactatgtattgtttgacaaaaaaataacagaaccgtatgccaatcgc
gtaaatatattcagtagcacaaatttgaggttctccaaagtgactcgtcaggataacggc
gaatatttttgtgatgtgtccagctccagtagcccgactaagaattccaaggtggctctg
actgtcctggtgccgccatctgtaccaaagtgtggaatcccccaaacagtgacgacaaat
gcatacgtcgcccttacctgccatgatcctgacagttctccaccaccaacatacaactgg
tacaaaggtaccaccctccttcctgctgacccgagcaagaatgttgccttcaaaaacgcc
acctacaagctggattcgaaaacaggaatgctggtgtttccttctgttaccaagatggac
actggggaatactactgcgaggtgagcaacgacgccggtccctcccagagctgcaaaagt
gtaaaaatggaagtccgtgacataaacaccggaggaattgttgccggggtaatctttggc
cttctgttcttgggccttttgataggcggcctttggtatgccaacaagaaaggatatctt
cccttgaaaagtgaaagcaacaagcagcaaaatgcggcctaccagcctccatcaatgtat
gctggtggtggtggtgaggaagataatggggagttcaaacagaagtcatcatttgtggtg
tag
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