Xiphophorus couchianus (Monterrey platyfish): 114153061
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Entry
114153061 CDS
T05908
Symbol
med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114153061 (med13)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
114153061 (med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
114153061
NCBI-ProteinID:
XP_027887127
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All DBs
Position
11:25502160..25597737
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AA seq
2149 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKKFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGWRELWLFWWGDDPNFADLIHHELAAEDDDLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKHEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPIYHLTEEHLALAQQASSPFQVILSPFGLKATLTGQSFKMSDPPTQKLIEEWNQFY
PISRSNKEGSSEDKPEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVAPVGSS
HCTAVYSGGHQVPASQREPAMSLVTLTPPTSPEETHTVDSQSAQKWVKMPSSSDAFSVDR
TSHHGGKIPRRLARQVVERVWQECNINRVQNKRKFPTTSNGTCEEEEVEKVGAWEFVVPS
QRSYCSCSRHKSGKQRTGSTPGQTQLTGQPSQPPTKHKTGGEKPEKQQKRPQTPFHHRSL
TSDETSIETEAAVAQRLAMRAQDSGRFRSADVTTLPKPPQLQGGAIGAGPSEQSNSPPPP
PLSPRPSERSEESGEGIKNPSTPNSQHFYQLPPEPCLAGAKGDGEEPGGPHSLSYHFHNP
HSHPGTSAFSEPPEPTVFVGSAVNLEDDGCHTPWRLFNLPRRKEAELPTPPLPGDKLRDE
AAASQDLVSVTEVMSTSKMPLKVSEDRLQMYRARRNQYLSAAFTDGDHEPEEDPYAFEEG
DVKFTFSTKKDKGGEREPGKKHKGEDEGTGQTDDAQHAAAHNRMASSSLMHVTDLVVSFT
DLDNLFNSDEDDLTPGTRRPVNGTDERFGNKEPKTSSLDPVSCISSADLHQMFPTPPSLE
QHIMGFSPMNMCNKEYNIMEPNPGMTSLDGTSTLGGHFKIEVEESFCSPKPSEIKDYSFV
YKPELCQAFVGCSMFAPLKTLPSQCLPPIKLPEDCVYRTSWTMGREMLSTVPVMGFLNKD
SNIPSVGSAMDQDYTQTYTPQTHTPFMSNSAPPSNSGTGILPSPATPRFSAPTPRTPRTP
RTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYLSGADAEDQDPCSCGFSAVVNRRYGNGSGLF
LEDELDIIGRGSDVSKEAEKSFEELRLSSLERTGVEREERVPDELIVLLQDQCTNPFSPI
SVMEHEAASRGLSGAPAAPCQRVEERDYRNDCYMALEHGRQFMDNMSGGKVDEALVKSTC
LHHWAKQNAVDVSSLCSQDVLRVLMSLQPVLQDVIQKKRMVRSWGVQGPLTWQQFHKMAG
RGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPYGSQRDIGYLVVCPDS
EAMLSGAKSFFRDLTAVYESCRLGQHRPISRSYPDGIVVVGGSGTKSVMDQPVSDWFHKA
AGSNSDAFTKLKLYAQVCRHNLAPYLASQTLDSSLLTQPSASSSSNQTSSTQQSNSSTAS
QQSSSVPNSNSSSSNVGSGSASASSNGLTASSGQPGSTMPSGKPNSFPPFGNMNSQGSQS
GQLGQQAGTQNAATSGDNSSSQAQGPTEPPESTLEREKIGVPTDGESHAVTYPPAIIVYI
VDPFSYEEADGGSGPVPTHSSVWTLGLLRCYLEMLQCLPPHIRNSISVQIVPCQYLLQQV
RGEDRHIYAQHLKSLAFSVFAQCRRPLPTSTNVKSLTGFGPGLAIDNSLKSTERPECLRL
YTPPFILAPVKDKQTELGETFGEASQKYNVMFVGYCLSHDQRWLLATCTDMYGELLETSI
INIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVPWRVVIGRLGRMGHGELKDWSIL
LSRRNLQSLSRRLKEMCRMCGISSSDTPSILSVCLVAMEPQGSFIIMPDSVSTGSVFRRS
TTLNMQTSQLNTPQDTSCTHILVFPTSASLQVASSNYTNIDTNIDILNPTTDGSDIGIFD
LLDQENELDPDIINISPTTSPVHSPSPHYHHGVDGSKGQSTDRMESHEEVPNLLQQPLAL
GYLVSTAKAGPLPDWFWSACSQAQNQCPLFLKASLHLHVSTVQSDELLHSKHSHPLDSNQ
TSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccgaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacggggatcaaatggaagaagttcgtgtggcagggtcccacctct
gcccccatcctcttcccggtgacggaggaggaccccatcctgtgcagtttcagccgctgc
cttaaggccgacgtgttgagcgtgtggcggcgcagccagcgacagggctggagggagctg
tggctcttctggtggggggacgaccccaacttcgccgatctgattcaccacgagctcgca
gccgaggacgacgacctgtgggagaacggcctctcctacgagtgtcgcactctgctgttc
aaagccatccacaacttgctggagcgttgcctcatgaaccgcagctttgtgcgcatcggc
aagtggttcgtcaaaccctacgagaagcacgagaagcccatcaacaagagtgagcacttg
tcctgcgcattcaccttctttctgcacggtgagagcaacgtgtgtaccagcgtggagatc
aaccagcaccagcccatctaccacctcacagaggagcacctagctctggcccagcaggcg
tccagtccatttcaagtcatcctgagtccgttcggcctgaaggcaacactgactggccag
tcgtttaagatgtcagacccccccacacagaagctgattgaggagtggaaccagttttat
cccatcagtcgcagtaacaaggagggctcttcagaggacaagcctgaggacatggactgg
gaggatgattctctggcctctgtagaggtcctcgttggtggggtgcgtatggtctaccca
gcctgcctggtgcttgtaccccagtcagatatccccgtcgtggcccctgtggggtcttct
cactgcactgccgtctactcgggtggtcaccaagtgcctgcttcccagcgagagcctgcc
atgtcattggtgaccctcacccctcccacgtcacccgaggagacgcacacagtggactct
cagtcggcccagaagtgggtcaagatgccatcatcatctgacgcattcagtgtggacaga
acaagtcaccacggagggaagattccacgcaggctggcccgtcaggtggtggagcgtgtc
tggcaagagtgcaatatcaacagagtgcagaacaagcggaagtttccaactacatccaac
ggtacctgtgaggaggaggaggtagagaaggttggagcctgggaatttgtggtgccttca
cagaggtcctactgcagctgctccagacacaaatcaggaaagcagcgaacaggcagcact
ccgggccaaacccagttgacgggtcagccctcccagcctccaaccaagcacaaaactgga
ggcgagaagccagagaagcagcagaaaagaccccaaacgccgttccatcaccgcagcttg
accagtgacgaaacatccatagagaccgaagcggcggtagcccagaggctggccatgagg
gctcaggacagcggacgatttcgatctgcggacgtcaccaccctccctaaacccccccag
ctccaaggtggagcgattggcgccgggccttcggaacagtctaattcaccgccgccgccg
ccacttagcccccgccccagcgagcgcagcgaagagtcaggggagggcataaagaaccct
tccacccccaacagccaacacttctaccagctacccccagagccctgcttggctggggcg
aagggcgatggcgaggagcccggcgggccccacagtttgagctatcacttccacaacccc
cactctcatccgggaacctctgccttctcggagcctcccgagcccacagtgttcgtgggc
tcagcggtcaacctggaggatgacggctgccacacgccgtggaggttattcaacctgccc
cgcaggaaggaggctgagctgcccacgccaccgctgcccggagacaaactgagggatgag
gcagctgcgtcacaggacctggtgtcggttacagaagtgatgtctacatctaaaatgcct
ctgaaggtgtctgaggaccggcttcagatgtatagagccaggaggaaccagtacctatct
gctgctttcactgacggagatcacgagccagaggaagacccctacgccttcgaggaagga
gacgtcaagttcacgttctccacgaagaaggataaaggaggagaacgggagcctggaaag
aaacacaagggtgaagatgaaggaaccggtcaaacagatgatgcacaacatgcggctgct
cacaatcgcatggcctcgtccagccttatgcacgtgacggacctggtggtttccttcacc
gacctcgacaacctcttcaattcggacgaggatgacctgacgcctggtaccagacgaccc
gtgaatggaactgatgagagatttggcaacaaggagccgaagacatcctcattggaccct
gtatcttgcatcagctcagcagacctgcaccagatgtttcccacgcctccctccctggag
cagcacatcatgggtttctcgcccatgaacatgtgcaacaaggagtacaacatcatggag
cccaaccccggcatgacctcgctggacggcacgtccacgctggggggccacttcaagatc
gaggtggaggagagcttctgcagccctaagccatctgagatcaaggattattcatttgtg
tacaagcctgagctgtgtcaggcatttgtaggctgctccatgtttgcccccctgaagacg
ttgcccagccagtgtctccctcccattaaactaccagaggactgcgtctacagaacaagc
tggaccatgggcagggagatgctcagtactgttcctgtgatgggcttcctaaacaaagac
agtaatattcccagtgttggcagcgccatggaccaggactacacccagacctacacccct
cagacacacaccccctttatgtccaacagcgctccccccagcaacagtggcaccggtatc
ttgccttcccccgccaccccacggttctcagcccccacgccgcgtacgccccggacgccg
cgcacccctcggggcccctccagcgtccagggctccctcaagtatgagaactcggacctg
tactccccggcgtccaccccttccacgtgccggccgctgaactcggtggagccagccacg
gtcccctctatccccgaagctcatagcctctacgtcacgctgatcctctcggagtcagtc
atgaacctcttcaaggactgcaacttcgacagctgctgcatctgcgtgtgcaacatgaac
atcaaaggcgccgacgtgggcgtatacctgagcggcgccgacgccgaggaccaagacccc
tgcagctgcggcttcagcgccgtggtgaacaggcgatacgggaacggctcgggcctcttc
ctggaggacgagctggacatcatcggccgcggctcggacgtcagcaaggaggcggagaag
agcttcgaggagctgcggctctcgtcgctggaaaggactggggtcgagagagaggagcgc
gttcccgacgagctcatcgtgctcctgcaggaccagtgcacgaacccgttttcgcccatt
tctgtcatggagcatgaggcagcgtcgagggggttgagcggcgcgccggcggccccctgc
caacgggtggaggagagagactaccggaacgactgctatatggctctggaacacggcagg
cagttcatggacaacatgtcaggcggcaaagtggacgaggcgctggtcaagagcacctgc
cttcatcactgggccaaacaaaacgcggtggacgtgagttctctgtgctctcaggatgta
ctgcgggtgctgatgtcgctccagcctgttctccaggatgtcattcagaagaagaggatg
gtgcggtcgtggggggttcaaggtcccctcacctggcagcagttccacaagatggctgga
cgtggctcttatggcacagatgagtctccagagcctctgcccatccccaccttcctggtg
ggctacgagtacgacttcgtggtgctctctccgttcggtttgccgtactgggaaaagctt
ctgctggacccgtacggctcccagcgggacattgggtacctggtggtttgccccgacagc
gaagccatgctcagcggcgccaaaagcttcttccgagacctcacagccgtttacgagtcc
tgtcgtctgggccagcaccggccgatttccaggagttaccccgacgggatagtggtcgtc
ggcggcagcggaaccaaaagcgtgatggatcagcccgtcagcgactggttccataaggct
gccggcagcaacagcgacgccttcaccaaactcaagctttatgcacaagtgtgccgacac
aaccttgctccttacctcgcttcacagacattagacagttcactcctcacacagcctagt
gcctcttcttcatccaatcagacgtcatccactcaacagtcgaactccagcacagccagc
cagcaaagttcctccgttcccaacagcaacagcagcagcagcaacgttggctctggaagc
gcctcagcatcatccaacggcctcaccgcatcctcaggccagcctggcagcaccatgccg
tccggcaaacccaactctttcccgcctttcggaaacatgaacagccagggttcccagagc
ggacagctgggacagcaggctggcacccagaacgctgccacctcaggggacaactccagc
agccaggcccagggacccacagagcctcctgaaagcactttggagcgggagaaaatcggc
gtgcccacagatggggagtcccacgctgtgacttaccctcccgccatcatcgtttacatc
gtagaccccttcagctacgaggaggccgacggcggctccgggcccgtgccaacccactcc
agcgtgtggacccttggtttgcttcgctgttacctggagatgcttcagtgtctgcctcca
cacattcgcaactcaatttctgtacagattgtcccatgtcagtatctacttcagcaagtc
agaggagaagatcgacatatctacgcacagcacctcaaatctctagccttctccgtcttc
gctcagtgcagacgtccgctgcccacctccaccaacgtcaagtcgctgaccggcttcggc
cccggcttagccatcgacaactcgctgaagagcacagagaggccggagtgtttgcgtctt
tacacgccgccgttcatcttggcgccagttaaggacaaacagacggaactcggcgagacg
tttggtgaagcatcgcaaaaatacaatgtgatgtttgtgggatactgcctgtcccacgac
cagcggtggcttttggccacatgcacagacatgtacggcgaactgttggagaccagcatc
atcaacatagacgtgcccaacagagctcggaggaaaaaaggctctgtacgtcgactgggc
ctgcagaagctgtgggattggtgcttgggactagtgcagatgacatctgttccctggaga
gtggtgattggccggttgggcaggatggggcacggagagttaaaagactggagcattttg
ttgagcaggagaaacctgcagtcactcagccgacgtctgaaggaaatgtgtcgaatgtgt
ggaatctcctcctccgacactcccagcatcctcagtgtgtgcttggtcgccatggagccg
cagggatccttcatcatcatgccagactccgtctccacaggctccgtgtttcgccggagc
accaccttgaacatgcagacgtcgcagctcaacaccccgcaggacacctcctgcacccac
atcctggtgtttcccacctccgcctctctccaggtcgccagctccaattacaccaacatc
gacaccaacatcgacatcctcaaccccaccaccgatgggtctgatattgggatctttgac
ctgctggaccaggagaatgagttggacccagacatcattaacatctcccccaccacttct
ccagtacactcccccagccctcactaccaccatggagtagacggcagtaagggtcagagc
acagaccggatggagtctcatgaagaggttcccaacctgctgcagcaacccctggcgctt
ggctaccttgtctccacagcgaaggccggcccactgcccgactggttctggtcagcttgt
tcgcaggctcagaaccagtgtccgctcttcctcaaggcctctttgcacctacatgtgtct
actgtgcaatcagacgaactgctgcatagcaagcactcccaccccctcgactccaatcag
acctcagacgtactcagatttgtgctggagcagtacaacgctctctcctggctgacgtgc
gacccagcaacgcaggaccgaagatcatgtctgcctattcactttgtggtgctcaaccag
atgtacaacttcatcatgaccatgttgtaa
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integrated database retrieval system
