Xiphophorus couchianus (Monterrey platyfish): 114153116
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Entry
114153116 CDS
T05908
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 2-like isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114153116
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
114153116
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xco01001
]
114153116
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xco04090
]
114153116
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
114153116
Protein kinases [BR:
xco01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
114153116
CD molecules [BR:
xco04090
]
Proteins
114153116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
Ig_2
I-set
ig
V-set
C1-set
LPD29
Motif
Other DBs
NCBI-GeneID:
114153116
NCBI-ProteinID:
XP_027887245
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All DBs
Position
11:14528934..14544047
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AA seq
1020 aa
AA seq
DB search
MRLHSVLLLIALGACAAAEPPGPTLIQLNSIFQPNQSEVILTAGSKVQLGCLGDGLVNMS
TTALRPLPRNCQNILQINSVSPRHTGTYHCRYANQSLDHLNTWIHLYVKDPGNNSTVFVT
PRSTPRYPKEGDNFLYRCLLTDPSVTDLTLQSEGEVRGRGLPPGMNVTLDPRKGALIKHI
RKTFKGRYSCSGWRNGQEFRSEPFALMVAPMDRPPSVAVSQGEWVRLQGERFTVTCQSSN
PSHSYTVTWTHPHTKDLAVSETTTYVNGYFNISSTLTVSAVNHQHSGLYTCTAVGRAGVA
TVTTHLTVLDHPYLRIYLQTANTQQVSDELPGNFSREETTEEPAANVSFGSEELQRELVF
NGSRGSGYRRVEVFEGGDLTLTFIMEAYPPIRQHHWTTPEHVNNDGSSMYERSYTATAYR
SEANLLVRRLRQEDAGRYSFNFSNLFFNGSQDVDLRIYHPPTVSVTQQNQSLMCSGSGYP
RPTVLWSVCTHVDRCEPNSNHQVSPSAATSEDEEEVRIFFPLSSPDDDVTVKCLAYNLVG
ESRQVFVHRSTGLRTVFTPALIGALSVSSVLLLLLLIVFYKCRQKPRYEILWKIIESNDG
NNYTFIDPTQLPYNQKWEFPRDKLRLGGVLGSGAFGKVVEATAYGLGTENKATRVAVKML
KPNAHSEEREALMSELKILSHLGYHDNIVNLLGACTQGGPMLMITEYCSQGDLLNFLRTH
APDFMASMITVDEVGDEVFYKNLTGQQERLRSDSGISCWSEYQEMQPALAPGPNEPGEHM
VSLSLCDLLRFSYHVAQGLDFLSSRNCIHRDVAARNVLLTDCRVAKICDFGLARDIQNDD
SYIVQGNARLPVKWMAPESIFQCLYTVQSDVWSYGVLLWEIFSLGKSPYPNVVVDTNFYK
MIKDGHHMEQPEFAPNEMYHLMKLCWSGEPTHRPTFKTIGQLIERLLPLTSDMLPRHSDQ
VMYANIDECRAEEEEEEEEEEKDEVQGGILKRKEEEQADRRDDGEGEEREPTMNNIYQLS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccattcagtgctgctgttgatcgccctcggtgcctgcgctgctgcagaacct
ccaggaccaacactgatccaattaaactcgatcttccaaccaaaccagtcagaggtcatt
ctgactgccggctctaaggtccagctcggttgccttggtgacgggttggtgaacatgtcc
accactgcgcttcgtccattaccgaggaattgtcagaacatcttgcagatcaacagtgtg
tctcccagacacaccggtacgtaccattgcaggtacgccaaccagagcctggaccacctg
aacacctggatacacctgtatgtcaaagatccaggtaacaactctacggtgtttgtcacg
cctcgctccacacctaggtatcctaaagagggtgacaacttcctgtacaggtgtctgctg
actgacccgtctgtcacagacctcaccctccaatcagagggtgaggtcagggggcggggc
ctgcccccaggtatgaatgtcaccttagaccctcgaaaaggagccttgatcaaacatata
aggaagaccttcaaaggccggtactcctgttcgggttggaggaatggtcaagagttccga
tcagagccgtttgccctgatggtggctcccatggaccgccctccctccgtcgctgtcagt
cagggtgagtgggtccgtctacaaggagaacggttcacagtcacctgtcagagcagcaac
ccttcacacagctacaccgtcacctggacccacccacacacaaaggacctggcagtcagc
gaaaccacgacctacgtcaatgggtactttaacatcagcagcactctgaccgtctctgct
gtcaaccatcaacacagcggactgtacacctgtactgctgttggcagagctggggttgcc
acggtaaccacccacctgaccgtgttggatcacccttacctgaggatctaccttcagact
gccaacacccagcaggtctccgatgagctgcctggcaactttagcagggaggagacgact
gaagaaccagcggctaacgtcagcttcggttcggaggagctgcagagagagctggtgttt
aacgggagcagaggcagcggctaccggagggtggaggtgttcgaaggtggagacctgacc
ctgaccttcatcatggaggcctatcctccaatcagacagcatcactggacgacaccggaa
cacgtaaacaatgatggcagcagcatgtatgagaggagctacacagctaccgcctacagg
tcagaggccaacctgctggtgcggcgccttcgtcaggaagatgccggtcgatattctttt
aatttttcaaacttgttctttaacgggtcgcaggatgtggacctccggatctaccatcct
ccgactgtcagtgtcacgcagcagaaccagtccctgatgtgcagcgggtctggttatcca
cggcccacggtcctctggtccgtctgcacccacgtggacaggtgtgaacccaactccaac
caccaggtgtctccatctgctgcaacctcagaggacgaggaggaggtgaggatattcttt
cctctgtccagccctgacgatgatgtcacagtcaagtgtttggcgtacaacctggtgggc
gagtctcgtcaagtgtttgttcatcgttccacaggacttcgcaccgtcttcactccagct
ttgattggagcgctgagcgtctcctccgtcctcctcctgctgctgttgattgtgttctac
aagtgcagacagaaaccaaggtatgaaattctgtggaagatcattgagagtaacgatggc
aacaactacaccttcattgaccccacccagctgccatacaaccagaagtgggagtttcct
cgagacaagctgcgacttgggggcgtcctgggctcgggggcgtttggaaaggttgttgag
gcgacggcgtacggcctgggaacagaaaacaaggccaccagagttgctgtcaagatgctc
aaacccaacgctcactcagaggaacgggaggctctgatgtcagagctgaagatcctcagc
catctcggttaccatgacaacattgttaacctgctgggagcgtgcacgcaaggaggcccc
atgctaatgatcacagagtactgtagccagggcgacctactcaacttcctacggactcac
gcgccagacttcatggcgtccatgatcaccgtagacgaggttggagacgaggtcttctat
aagaacctgacaggacagcaggaaaggctacgcagtgacagtgggatttcatgctggtca
gagtaccaggagatgcaaccggcactggctccaggtccaaatgagccaggtgagcacatg
gtgagcctgtccctctgtgacctcctgaggttttcctaccatgtggctcagggattggac
ttcctgtcctccagaaactgtatccacagagacgtggctgcgaggaacgtcctgctgacc
gactgtcgggttgcaaagatctgtgacttcggtttggctcgagacattcaaaacgatgac
agctacatcgttcagggaaacgcccggctgccggtgaagtggatggctccagagagcatc
tttcagtgtctgtacacagttcagagtgacgtctggtcctacggggtcctgctctgggag
atcttctctctgggtaagagtccgtaccccaacgttgttgtggataccaacttctacaag
atgatcaaagatggccaccatatggagcagccggaattcgctcctaatgaaatgtatcac
ctgatgaagctctgctggagtggggagcccacccacagacccacctttaaaaccattggt
cagctcatcgaaaggctcctccccttgaccagtgacatgttgccgcgtcacagtgaccag
gtgatgtatgcaaacattgatgaatgcagagcagaagaagaagaagaggaggaggaagag
gagaaggatgaggtccaaggtggaatactgaagagaaaagaagaagagcaagcagatcgc
cgtgacgacggtgaaggagaggagagggagccgacgatgaacaacatctaccagctctcc
tga
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