Xiphophorus couchianus (Monterrey platyfish): 114153178
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Entry
114153178 CDS
T05908
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114153178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114153178
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114153178
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
YVC1_C
Ank_4
Motif
Other DBs
NCBI-GeneID:
114153178
NCBI-ProteinID:
XP_027887348
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Position
11:24166932..24175920
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AA seq
791 aa
AA seq
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MFHSRLPEFYVKMRKSELFDFRLEADDRTEEEKRKQKAPKKDGLASALGLSKEAPKAPMD
TDYQEEMEPVKPQIRFNLNFDKEIQGEASRPKRDSSTFTIERLFEAVASRDVNKLDGLYQ
YLNQNMKKLSDSLYQSYGKTALMKALLHLKDGKNETIEELVSVSERIGDIKEFVNAAFTD
SYYKGQTALHIAIERRSMSYVKLLLSKGADVHAKACGKFFQPHDGPNFYFGELPLSLAAC
TNQSDIVSYLMENEFPADAKMADSHGNTVLHALVLVADNSKENTEFVTAIYDRILKTNAR
LHPKIKLEEKENNDELTPLKLAAKNGKIGVFSHILQREFQVNHFKHLSRKFTEWAYGPVH
SSLYDLTSVDSYENNSVLEILIYGSEIPNRHEMLEKEPLSCLLEDKWKKFGRGMFFFNFL
VYLVYLIIFTVVAYNKKDATQLPFIPEDAWDYLYVSGQLLTLLANCYFFVTGIIEMKRKS
PKMQTLLIDGYYEILFFAQGLLFLVATVLYWAGRQEYLGFLVISLALSWVNMLYYSRGDK
HMGIYSVMIQKMILSDILRFLFVYIVFLFGFSAAVVTLLIQPPPENRTGKGRQGFFATSK
PDTECFTPSYRNISYTTLQLFKFTIGMGDMEFTQEYQYMEVFYVLLIGYIILTYILLLNM
LIALMSRTVEKITTESASIWRLQRAVTIMDMERRLPCCLKKSFRSGVERKLCTAIGDDRR
RCFRVEEMNWNKWNTNLVNISEDPGCCDLSQQPDLDSPSRGFNRGRSWRDIFMEGSWRRR
RPPQSTEMSLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccagattaccagagttttatgtaaagatgaggaaatcagagctttttgat
ttccgtctggaggcagatgacagaacggaggaggagaaacggaagcaaaaggcaccaaag
aaggatggcttggcttctgctttagggttgagcaaggaggcccctaaggcccccatggac
accgactaccaggaggaaatggagccggtcaagcctcaaatccgattcaatctcaacttt
gataaagagattcaaggtgaggcatcacggccaaagagagacagctccactttcaccatt
gagcgtctgtttgaagcagtggccagcagggacgtcaacaaattggatggcctataccag
tacttgaatcagaacatgaagaaactctctgactctctgtatcagtcgtacggtaaaacc
gccctgatgaaagctctgctgcacctcaaagatggcaagaacgaaaccatagaggagctg
gtcagcgtttcagagaggatcggcgacataaaagagtttgtgaacgccgcattcaccgat
agctactataaaggtcaaactgctctacatatagccattgagaggaggagtatgtcctat
gtaaagctgctgctcagcaaaggtgcagatgttcatgccaaagcctgtgggaagtttttt
cagcctcatgatggtcccaacttctactttggtgagctgcccctgtctctagcagcctgc
acaaaccagtctgacatagtgagctacttaatggagaatgagtttccagcggacgccaag
atggctgactctcacggcaacacagtgctgcacgccctggtgttggtggccgataactcg
aaggagaacacagaattcgtaacggccatttatgatcgcatcctaaagaccaatgcccga
ctgcatcccaagataaagctggaggagaaagagaacaatgatgaactcacacctctcaaa
ctggctgccaagaatggcaagattggggtattttctcacatcctacaaagggaattccag
gtgaatcacttcaagcacttgtcccgtaaattcactgagtgggcttatggacccgtccac
agttctctgtatgacctgacctctgtggactcatacgagaacaactctgttctggaaatt
ctaatctatggcagtgaaattcccaaccgccacgagatgctggagaaggagccgctcagc
tgcctcctggaggataagtggaagaagtttggacgtggaatgttttttttcaacttcctg
gtctaccttgtgtacctgatcatcttcactgttgtagcctacaataaaaaagatgctaca
cagcttccgtttatccctgaggacgcctgggattacctgtatgtttcaggccagctgctg
actttactagcaaactgctatttctttgtcacagggattatagaaatgaagaggaagagc
ccaaagatgcagacactgctgattgatggatattatgagattctcttcttcgcgcagggc
ttactgttcctggtcgccactgttctgtactgggcggggaggcaggagtacctgggcttc
ctggtgatctctctggctctcagctgggtgaacatgctgtactactccaggggcgacaaa
cacatgggcatctacagtgtcatgatacagaagatgatcctcagcgatatcctgcgcttt
ctttttgtttatattgttttcctctttggattctcagcagccgtcgtcacactgctcata
caacctcctcctgaaaacagaacgggaaaagggaggcaaggattttttgctacctccaaa
cccgacacagagtgtttcacgcccagctacagaaacatctcctacactaccctgcagctc
ttcaagttcaccatcggcatgggcgacatggagttcacccaggagtaccagtacatggag
gtcttctacgtcctccttatcggctacatcattctcacctacatcttgctcctcaacatg
cttatagccctaatgagccgcacagtggaaaagatcaccacggagagcgccagcatttgg
aggctgcagagggctgtcacaatcatggacatggagaggcggctaccctgctgtctgaag
aagagttttcgctctggggtggagaggaaactctgtaccgctattggagacgatcgtcgg
aggtgtttcagggtcgaggaaatgaactggaacaaatggaacaccaacctggtcaacatc
agtgaggatccaggatgctgtgatctgagccagcagcctgatttggatagcccttccaga
gggtttaacagagggaggagctggagagacattttcatggagggttcttggaggaggagg
aggccgcctcagtctaccgagatgagcctcctgtaa
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