Xiphophorus couchianus (Monterrey platyfish): 114153263
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Entry
114153263 CDS
T05908
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114153263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114153263
03036 Chromosome and associated proteins [BR:
xco03036
]
114153263
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114153263
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114153263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
Lar_restr_allev
zf_RING_Vps8
PHD_2
Motif
Other DBs
NCBI-GeneID:
114153263
NCBI-ProteinID:
XP_027887462
LinkDB
All DBs
Position
11:18924014..18938220
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AA seq
414 aa
AA seq
DB search
MAAVVENVVKLLGEQYYRDALEQCHNYNARLCAERSVRMPFLDSQTGVAQSNCYIWMEKR
HRGPGMAPGQLYTYPARRWRKKRRSHPPEDPRLIFPPVKSELDLGLKKDVLLSSDGSSLE
ALLKGEPLDKRTPADIRGSEEDSNQSDYTGSLNSSTRIRKRILEPDDFLDDLDDEDYEED
TPKRRGKGKGKGRGVGSGRKKLDTAALEDRDKPYACDNTIKQKHISKPSERVCGKRYKNR
PGLSYHYAHSHLAEEEGEEKDDLEMNEPTLPLPEEPKTAPKKGPDGLALPNNYCDFCLGD
SKTNHKTGQSEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNMCGTSEND
DQLLFCDDCDRGYHMYCLNPPMSEPPEGSWSCHLCLDLLKDKASIYQNQNAPTS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgttgagaatgttgtcaaactattgggagagcagtactacagagatgcc
ttggagcagtgtcacaactacaacgccaggctgtgcgctgagaggagcgttcggatgccg
ttcctggactctcagaccggcgtggctcagagcaactgctacatctggatggagaagaga
caccggggccctggcatggctccgggtcagctctacacgtacccagccaggaggtggagg
aagaaacggagatctcatcctccagaagacccgcgcctcatcttccctcctgtcaagtca
gaattagatttggggttgaagaaggacgtcctgctgtcgtcggatggcagcagcttggag
gccttgctgaagggggaacctctggacaaacggaccccggcggacatccgggggtcagaa
gaagactccaatcagagcgactacaccggcagtctgaactcctccacccggattagaaag
agaatcctcgagccagacgacttcctggatgacctggacgacgaagactacgaggaagac
acgcctaaaagaagaggcaaagggaaagggaagggtcgaggagtgggtagcggcaggaag
aagctggacacagcagcgttggaggacagggacaaaccctacgcctgtgacaacactatc
aaacaaaagcacatttcaaaaccttctgaaagagtctgtgggaagcgctacaagaaccgc
ccaggcctgagctaccactacgcccactcccacctggcggaggaggagggcgaggagaag
gacgacctggagatgaacgagccgaccctcccgctgcccgaggagccaaaaacagctccc
aaaaaaggcccagatggtcttgcattacctaataattactgcgatttctgcttgggagac
tccaaaaccaatcacaagacgggccaatcagaagagctggtgtcctgctcggactgtgga
cgctctggccacccctcctgcctgcagtttactcctgtaatgatggctgctgtgaagacg
tatcgctggcagtgcatagagtgcaaatgctgcaacatgtgcggtacctctgaaaatgat
gatcagcttctcttctgtgatgactgcgatagaggctatcacatgtactgtctcaacccg
ccgatgtctgaacctccagaagggagctggagctgccatttatgtctggaccttctgaaa
gacaaggcgtccatataccagaatcagaacgcacctacgtcgtga
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