Xiphophorus couchianus (Monterrey platyfish): 114153322
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Entry
114153322 CDS
T05908
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114153322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114153322
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
114153322
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
114153322
NCBI-ProteinID:
XP_027887582
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Position
11:complement(20138582..20156590)
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AA seq
1275 aa
AA seq
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MIAAQDLHAEFQFPQESESQLSSDADLEDPDGRNATAGRGMGAKRGRKVLGDKVKGGGAG
RVSGAGWVNGHHQENGTDNMSLFEVVKMGRSATQSVVDEWIEAYKQDRDVALLELINFFI
QCSGCKGAVSEEMFRHMQNSEIIRKMTEEFDEDSGDYPLTLSGPQWKRFRINFCDFIAVL
VRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMD
NTQRQYEAERNKVIAKRANDRLELLLQKRKELQENQDDIENMMNAIFKGVFVHRYRDAIA
EIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLFYSRELGS
RLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLILQSSDEVLTAEDCESVYHLVYSAHR
PIAVSAGEFLFKKLFSHQGPEDEGLPRRGRQSLNGSLIKTTVFFFLESELHEHGAYLVDS
LWECASELLKDWETMISLLLDEPMPGEEALTDRQETALVEIMLSAIRQACECHPPVGRGS
GKRVLTAKEKKTQLDDRTRTTEMFAVALPLLLAKYCVDIDKVTSLLQIPKYFDLDIYTTG
RLEKHMDALLRQIWEVVDKHTDTEVLEACSTTYHYLCNEEFTIFNRVDIARSQLLDELVD
KFNRLLEDFLQEGEEPDEDDAYQVLSTLKKITAFHNAHDLSKWDLFTSNYSLLSTGLQNG
DMPEQIVIHAMQCTHYIVLWHLAKVSEGSSIKGDLVTLRKQMRTFCLICQRYLSSINTAV
KEQAFTILCDVLLIFSHQIMSSGREHLENLVYVPDSSLQAELLTFILYQVFIDQDDDSNS
TDGQQDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKET
MSKTRQIDKIQCAKTLILSLQKLFNEMMSELGFNFDRSSSAFCGIKELARRFSLTFGLDQ
LKTREAIAMLHKDGIEFAFKEPSPQGEGGPPLNLPFLDILSEFSSKLIRQDKRTVHMYLE
RFMTFQMALQRDDCWLPLISYRNSLQAGMDDDTMSVISGISSRGSVRSKKSKQSAVSKRK
LPEEENSSSSFDGVWMNREQSVPTPVMMHSPHLTSTVLRDPKRMRPEDGYATTFSMPAEQ
HLHQALPPQPLPHHQHQAAIDYNTQVTWMLTQRQQAEARQHQERISMHYAKMRNHTQQAI
RRGSGLMEDDEEPIVEDVMMSSEDRLEDINEGMDFNTMEIDLPASKNRRERNELKPDYFD
PSSIMDNSVLNVSMF
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcacaggatttgcacgcagagttccagtttccccaagagtcagaatctcag
ttgtcttcagatgcagaccttgaggatcctgatgggcgaaatgccacagcggggagaggc
atgggagcaaaaagggggcggaaggtgctgggagacaaggtcaaaggtgggggtgcaggg
agggtctctggtgccggctgggtgaacggccatcatcaggagaacgggacggacaatatg
agccttttcgaagtggttaaaatgggaaggagtgcaacacagtctgttgttgatgagtgg
attgaggcctacaagcaagacagagatgtggcgcttttggagttaatcaacttcttcatc
cagtgctcggggtgtaaaggtgctgtgagtgaagaaatgttcagacatatgcagaattct
gaaatcatcaggaaaatgacggaggaattcgatgaggacagcggcgactatcctttaaca
ctctcagggccacagtggaaaagattccggataaatttctgcgacttcattgctgtcctc
gtgcgtcagtgccagtacagcatcatatatgatgagtatatgatggacacggtcatctct
ctgctcactggcctgtctgactcgcaggtcagggcatttagacacacaagcacactagca
gccatgaagttgatgactgccctggtgaacgtcgctttgaacctgagcatcaacatggac
aacactcagagacagtacgaggcagaacggaacaaagtcattgcaaaaagggccaatgat
aggttggagctgttgttacaaaagcgaaaagagctccaggaaaatcaagatgatattgaa
aacatgatgaatgcgattttcaaaggagtctttgttcacagatatcgtgatgccattgct
gaaattcgagctatttgtattgaggagattggagtgtggatgaagctgtacagtgatgcc
ttcctcaatgacagctacttgaagtatgttggctggacaatgcacgacaagcaaggtgag
gtgcgactgaagtgcctgaccgccctgcaggggttgttctacagcagagagcttggctcc
cgcctcgaactcttcaccagtcgctttaaggaccgcattgtgtctatgactctggacaaa
gaatacgacgttgcagtgcaagctattaagctcctgacgcttattttacagagcagtgat
gaggttctgacagcagaggactgtgagagtgtgtatcacctggtttactcagcgcatcga
cccatcgctgtttctgcaggagaatttctgtttaaaaagctcttcagccatcaaggtcca
gaggatgaaggtctaccaaggaggggcaggcagagcctcaacggcagccttatcaagaca
actgtcttcttcttcttggagagtgagctccatgaacatggggcttatttggtggacagc
ctgtgggagtgtgcgtcagagctgctgaaggactgggaaaccatgattagcttgttgctg
gatgaacccatgccgggagaggaggccctcactgatcgacaagagacggctctggttgag
atcatgctctctgccattcgacaggcttgtgaatgtcatcctccagtaggcagaggctca
ggaaagagggtcttgactgcaaaagaaaagaaaactcagctggacgatcggacacgaacc
acagagatgtttgcagttgcactacctctgttattagcaaagtactgtgtggacattgat
aaggtgaccagtttactccaaataccaaaatacttcgatcttgacatctacaccaccggc
cggttagaaaagcatatggatgccttgctgcgccaaatctgggaggttgtggataaacac
acagacactgaagtgctggaggcctgctccacaacctaccactacctgtgcaacgaggaa
ttcaccatcttcaaccgcgtggacatcgcccggtcacagcttctagatgagctggtagac
aaattcaacagacttctggaggacttcctgcaagagggggaagaaccagatgaggatgac
gcctaccaagttctatcaacacttaagaaaatcactgcttttcacaatgcacacgatctt
tccaagtgggatctgttcaccagcaactacagcctcctcagcacaggtttgcagaatgga
gacatgcctgaacagattgtgattcatgcaatgcagtgcacacattacatagtcttgtgg
caccttgctaaggtttcagaaggcagttcaataaagggggatttggtgactctgagaaaa
cagatgagaactttctgcttaatatgccagcgttacctaagcagcatcaacacagccgtt
aaagagcaggctttcacaatactgtgtgacgtgttgctgatcttcagtcaccaaatcatg
tcgtcaggccgggaacatctggagaatctggtctatgtgccagattcctctctgcaagcg
gaactgctcaccttcatcttgtatcaagtttttatcgatcaggacgatgacagcaacagc
acggatggacaacaagatgatgaggccagtaaaatcgaggctctgcacaaacgaagaaac
cttcttgcagcctattgcaaattaattatatacaacgttgttgaaatgaatactggagcc
gatatatttaaacagtacatgagatattacaatgactacggtgatatcatcaaagaaaca
atgagtaaaacgagacaaattgacaaaatccagtgtgcaaagacgctcatattgagtctg
caaaagttattcaatgagatgatgtctgaacttggcttcaactttgaccgctcatcgtca
gctttctgtggaatcaaagaactggctcgacgcttctctctaacctttggtttggaccag
ttgaagactagagaggccattgcaatgttacataaggacggcattgagtttgcatttaaa
gaacccagtcctcaaggagaagggggtccgccacttaatctgccatttttggatatcctc
agtgagttctcaagcaaactcattcgacaagacaagaggacagttcacatgtacctggag
cgattcatgacgtttcaaatggccctccagagagacgactgctggctgcccctcatctca
tacaggaattcgctgcaggccgggatggacgacgacaccatgtctgtcatcagtgggatc
agcagtcgggggtccgttcgaagcaagaagtccaaacaatccgctgtaagcaaaagaaaa
ctgcccgaagaagagaacagcagcagcagctttgacggagtctggatgaatcgtgagcag
agtgtgcccacgccggtcatgatgcactcgccccacctcacttccactgtgctgagggat
ccaaagaggatgaggccggaggacggctatgccaccacgttctccatgccagcagagcag
caccttcatcaagcgctccctcctcaaccgctgcctcatcaccaacaccaggctgccata
gattacaacacccaggtgacctggatgctgacgcagaggcaacaggctgaagcccgtcag
caccaggagcggattagcatgcactacgctaagatgaggaaccacacgcagcaagcaatt
cgccgaggatccggattaatggaggatgatgaggaaccgatagtggaggacgtgatgatg
tcatcagaggatcgcttggaagatatcaatgagggcatggattttaatacgatggagatc
gatttgcctgcatctaagaatcgaagagaaagaaatgaactaaagccagattactttgat
ccgtcttccattatggataattcggttcttaatgtttcaatgttctaa
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