Xiphophorus couchianus (Monterrey platyfish): 114153396
Help
Entry
114153396 CDS
T05908
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00061
Fatty acid biosynthesis
xco00071
Fatty acid degradation
xco01100
Metabolic pathways
xco01212
Fatty acid metabolism
xco03320
PPAR signaling pathway
xco04146
Peroxisome
xco04216
Ferroptosis
xco04920
Adipocytokine signaling pathway
Module
xco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
114153396
00071 Fatty acid degradation
114153396
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
114153396
09143 Cell growth and death
04216 Ferroptosis
114153396
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114153396
03320 PPAR signaling pathway
114153396
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xco01004
]
114153396
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114153396
Enzymes [BR:
xco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
114153396
Lipid biosynthesis proteins [BR:
xco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
114153396
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of breast milk
114153396
Exosomal proteins of breast cancer cells
114153396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
114153396
NCBI-ProteinID:
XP_027887733
LinkDB
All DBs
Position
11:4537656..4575523
Genome browser
AA seq
722 aa
AA seq
DB search
MLAFVLVSGSLWIILELSSTLMEKMQVQDMMSGLRIPEMDELGQFFRSLPTSTLVGIGAL
TAVLAYWFATRPRPIKPPCSLLHQSEEVPHEDGGRRSMMGDPTRLLTHYHDDARTMYEVF
QRGLHISGDGPCLGSRLPNQPYKWMSYKEVSARAEHLGSGLLHQGCQPNPDQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGADAIRFIINTADISTVICDKVKKAQVLLANVERK
ATPKLQRIILMDTFDSELETRGKACGVHVQALQEVEALGREYYRTPIPPAPDDLSIVCFT
SGTTGNPKGVMLTHGNVVADFAGFLKVTDTVIFPNQDDCLISFLPLAHMFERLIENVVYC
HGGRIGFYQGDIRLLPDDMKALRPTIFPVVPRLLNRMYDKIFSQANTPVKRWLLNFAAKK
KGAEVSRGVIRSDSIWDKIFFSKIQASLGGRLRMIITGAAPTSPNVLSFLRAALGCQVYE
AYGQTECTAGCTYTTPGDWTSGHVGAPLPCNLIKLVDVPEKNYFASKGEGEVCVKGPNVF
KGYLKDPERTAETLDADGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIENI
YIRSEPVAQLYVHGDSLQSCLVGIVVPDPEVMPEWAKKKGILGTYKDLCKNTELKKAILE
DLVRLGKANGLLSFEQVKNIYIHNEMFSIENGLLTPTLKAKRPELKEFFKNKIDALYSSI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcattcgtcctggtctctgggtcactctggattatattagaattgagttccacc
ctaatggagaagatgcaggtccaggacatgatgagtggcctgaggataccagagatggac
gagctgggccagttctttcgctccctgccgacctccaccttggtgggcattggcgccctg
acagctgtgttggcgtactggtttgccaccagacctcgacccatcaagcctccctgtagt
ctccttcaccagtccgaggaagtgccgcatgaagatggaggtcgaagatccatgatgggc
gacccgaccaggttgctaactcattaccatgacgacgccaggaccatgtatgaggtcttt
cagagaggcctgcatatatccggcgatggaccctgcctgggctctcgactcccaaaccag
ccctacaaatggatgtcctacaaagaggtttctgcccgggccgagcatctgggctcaggc
cttctgcaccagggctgccaacccaaccccgaccagttcattggagtgtttgcacagaac
agacccgagtggatcatctcagagctggcttgttacacctactccatggtggtggttccc
ctgtacgacacgcttggtgccgacgctatacggttcatcattaacactgctgacatctcc
acggtaatctgcgataaagtcaaaaaagctcaggttctgttggccaacgtggagcgaaag
gcaacaccaaagctgcaaagaatcattctgatggacacctttgactctgagctcgagacc
cgtggcaaagcctgtggtgtccatgtgcaggccctgcaggaagtcgaggctctgggcagg
gagtactacagaacacctatacctccggcccctgatgatctgtccattgtgtgtttcacc
agtggaacaacaggaaaccccaagggagttatgctcacccatggaaacgtggtggcagat
tttgcaggatttcttaaagtcacagatacagtcatttttccaaaccaagacgattgcctc
atctccttcctgccgctggctcacatgtttgagagactaattgagaacgtggtctactgc
cacggaggtcggatcggcttctaccagggagacatccggcttctgcccgacgacatgaag
gccctgcggccaaccattttccccgtggtgcctcggctgctcaaccgcatgtacgacaag
atttttagccaggcaaacaccccggtgaagcgctggctgctcaactttgctgccaagaaa
aaaggggccgaagtcagcagaggcgtcattcgcagtgacagcatctgggacaaaatcttc
ttcagtaagattcaggccagcctgggaggaaggctcaggatgattataactggagcggct
cctacctcacccaacgtcctgagtttcctcagagcagctctaggttgccaggtatatgag
gcatacggacaaacggagtgcacagctggctgtacctacaccacacctggagactggacc
tcaggtcatgttggcgctccactgccgtgtaacctcattaaactggtggatgttcctgaa
aagaactactttgcatccaaaggagagggagaagtctgcgtgaagggaccaaacgtgttc
aaaggctacctcaaagacccggagagaacggccgagacgctggacgcagacggttggctc
cacaccggagacatcggcaaatggttacctaacggcacgctgaagatcatcgacaggaaa
aaacacatcttcaagctggcgcagggcgagtacatctcccctgagaagatcgagaacatc
tacatcaggagtgaaccggtggcgcagctctacgttcacggcgacagtctgcagtcctgt
ttggtgggaatcgtggttcctgaccctgaagtgatgcctgagtgggccaagaagaaaggc
attctgggaacttacaaagacctttgtaaaaacacggaattgaagaaggctatccttgaa
gatttggtgcgtctgggcaaagctaatggcctcctatcgtttgagcaggtgaagaacatc
tacatccacaatgagatgttctccattgagaacggcctcctgaccccgacgctaaaggcc
aagcgacccgagctgaaggagttcttcaagaacaagattgacgccctctacagcagcatc
tccatgtga
DBGET
integrated database retrieval system
