Xiphophorus couchianus (Monterrey platyfish): 114153428
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Entry
114153428 CDS
T05908
Name
(RefSeq) DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114153428
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
114153428
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Topoisomerases
114153428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
114153428
NCBI-ProteinID:
XP_027887780
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Position
2:5176877..5195127
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AA seq
736 aa
AA seq
DB search
MGRESDAKGDAKLKQKGRKLKRLSDRENAGSGGDLMKKRSTKSKEKKNNDRPPKKVREIL
EPVSSSSDLMKLELQDDLTEKKKGLKRKRVKDEPIEEAAASFSERGIKPLSEEEASEEEA
QKKESKKKPRKTVKKEEGEQPVTKKPKRSKEEIEEAKMLKTKKKEEEEQNRWRWWEEERY
EDGVKWKSLEHNGPYFPPEYQPLPDDVNFFYNGKKMKLSLAAEEVALFFAQMLDHEYTTK
KVFRENFFKDWRKEMTRQERLVITDLEKCDFRELHAFHKDKVEARKALSKEEKQDQKDAN
QKIVDKYGYCLLDSHRERIGNFKLEPPGLFRGRGEHPKQGMLKKRIQPEDVIINCSKEAT
PPAPPAGHHWKDVRHDNTVTWLASWTENVQGSIKYIMLNANSKLKGEKDWEKYEVARKLK
SCVDSIRDGYLRDLKSKQMVARQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEH
ITLHDELDGSECVVEFDFLGKDSIRYYNKVPVIKKVFKNIKLFMESKDPGDELFDRLNTA
LLNKHLSSLMPDLTAKVFRTYNASITLQQQLRQLTNKSDNVAEKLLSYNRANRAVAILCN
HQRAPPKTFEQSMANLHSKIVARKEQLALAKTELKLAKKEMKTKDSPDSKLQSMVDRKAA
AVKRCEDQLLKMELQATDREENKQIALGTSKLNYLDPRISVAWCKNMDVPIEKIYNKTQR
EKFAWAIDMTEADFEF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagaaagtgacgctaaaggagatgcgaagttgaagcagaaagggaggaagctg
aagcggttgagtgaccgtgagaatgccggttccggtggagatctgatgaagaaaaggtca
acaaagtccaaagagaagaagaacaatgacaggcctcctaagaaggtcagggaaatcctg
gagccggtcagcagctccagtgatttgatgaaactcgagctgcaggacgacttgactgag
aagaagaaaggattgaaaaggaaacgtgtgaaagacgagccgatagaggaagcagctgca
tccttctcagagagaggaatcaagcccctcagtgaagaagaagcaagtgaagaagaagct
cagaaaaaagaatccaagaagaaacccagaaagacggtcaagaaagaggaaggagagcag
ccagtcaccaaaaaacccaagaggtcaaaggaggagatcgaagaagccaaaatgctgaag
acgaagaagaaggaagaggaggagcagaaccgctggagatggtgggaggaagagcggtac
gaagacggagtgaaatggaagtccttggagcacaacggaccttacttccctccagagtac
cagcctcttcctgacgacgttaacttcttctacaacggtaagaagatgaagctgagcctg
gcagcagaggaggtggcgcttttctttgcccagatgttggaccatgaatacacaaccaag
aaggtgtttcgtgagaacttcttcaaagactggaggaaggagatgacccgtcaggagcgg
ttagtgatcacagatctggagaagtgtgacttcagagaactccacgccttccataaagac
aaggtggaagccaggaaggctctgagcaaagaggagaagcaggatcagaaagatgccaat
cagaagatcgtggataaatatggctactgcctgctggatagccacagagaacgcatcggg
aattttaagttggagcctccaggtctgttccgagggagaggagagcatcccaagcaggga
atgctgaagaaacggatccaaccggaagatgtcatcatcaactgcagcaaagaggccacg
ccacctgcgccccctgctggtcaccactggaaggacgtacggcacgacaacaccgtgacg
tggctggccagctggaccgagaacgtccagggatccattaagtacattatgctcaacgcc
aactccaaactgaagggagagaaggactgggagaaatacgaggttgctcggaagctcaag
tcgtgtgtggacagcatccgggacggttacctccgcgacctcaagtccaagcagatggtg
gcgaggcagagagccgtggccctgtacttcatagacaagctcgccctgagagcgggaaac
gagaaggaggagggcgagacggcggacacggtcggctgctgctcgctgcgcgtcgagcac
atcacgctccacgacgagctggacggcagcgagtgcgtggtggagttcgacttcctgggg
aaagactccatccgctactacaacaaggtgccggtcatcaagaaggttttcaagaatatt
aagcttttcatggagagcaaggatcctggagacgaactcttcgaccgtctaaatacggcc
ctcctgaacaaacacctgagctctctgatgccggacctgactgccaaggtgttcaggacg
tacaacgcctccatcaccctgcagcagcagctgcggcagctaaccaacaagtctgacaac
gtggcggagaagctgctgtcctacaacagagccaacagagccgtcgctattctctgcaac
caccagcgggcgccgccaaaaaccttcgaacagtcgatggccaacctgcactccaagatt
gttgctagaaaggagcagctggctctagccaagacggaactgaaactggccaagaaggaa
atgaaaaccaaagacagtccggacagcaagctgcagagcatggtggacaggaaggcggcg
gcggtgaagcgctgtgaggaccagctgctgaagatggagctccaggcgacggacagagag
gagaacaagcagatcgcactcggtacttccaagctcaactacctggacccgcggatcagc
gtggcctggtgtaagaacatggacgtacccatagaaaagatctacaataaaacccagcgg
gagaagttcgcctgggccatcgacatgacggaggctgactttgagttctga
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