Xiphophorus couchianus (Monterrey platyfish): 114153506
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Entry
114153506 CDS
T05908
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2 isoform X1
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114153506 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114153506 (zmat2)
Spliceosome [BR:
xco03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114153506 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
114153506 (zmat2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
SNRNP27
DUF4250
MG280
C2H2-zf_KIN17
Herpes_gp350_A
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
114153506
NCBI-ProteinID:
XP_027887908
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Position
11:complement(13739161..13742769)
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AA seq
201 aa
AA seq
DB search
MASGSGSSKNDFRRKWDKDEYESLAQKRLVEERELEKRDGKIVPPVKRELLRHRDYKVDL
ESKLGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSS
LDQVKKRFEVNKKKLEEKQKEYDFEERMKELREEEEKAKAYKKEKQKERKRRAEDDVELE
EDDEMAAVMGFSGFGSSKKSH
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggcagtgggtcgagtaagaacgacttccgtcggaaatgggacaaagacgag
tacgagtctctggctcagaaacgtctggtggaggagagggagctggagaagagggatggg
aagattgtcccgcctgtcaagcgggaactcctgcgtcaccgggactacaaggtggacctg
gagtccaagctggggaagaccatcgtcatcaccaagacgacgccgcaggctgagatgggc
gggtactactgcaacgtgtgcgactgtgtggtgaaggactccatcaacttcctggatcac
atcaacgggaagaaacaccagaggaacctgggcatgtcgatgcgggtggagcgctcgtct
ctggatcaggtgaagaaacgcttcgaggtgaacaagaagaagctggaggagaagcagaag
gagtatgactttgaggagcgaatgaaggagctgagggaggaggaggagaaggcgaaggcc
tacaagaaggagaagcagaaggagaggaagcggcgagctgaggacgacgtggagctggag
gaggacgacgagatggccgccgtcatgggattctccgggttcggctcgtccaagaagagc
cactga
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