Xiphophorus couchianus (Monterrey platyfish): 114153524
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Entry
114153524 CDS
T05908
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114153524
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Other
114153524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
V-set_CD47
C1-set
Interfer-bind
fn3_2
Ig_C17orf99
C2-set_3
Motif
Other DBs
NCBI-GeneID:
114153524
NCBI-ProteinID:
XP_027887927
LinkDB
All DBs
Position
11:complement(26859010..26961038)
Genome browser
AA seq
2028 aa
AA seq
DB search
MWILALIFSQCILNVFCEDLRSSLYFVNASVQEVVFASTTGTSVPCPAAGVPPVSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHIPPSSFSKLIHDNTYYCTAENPSGRIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVVVFKCIIPASVEAYITVVSWEKDTMSINAEMSRFLITSTG
ALYILDVQMEDGLYNYRCMTRHRYTGETRQSNSARLIVSDPTNSAPHILDSFERREVMTN
HRVELPCKASGHPAPKYRWLKDNRPLEPDTRFRQSVTGLLIERAQPSDTGAYVCEVWNGY
GNAEVVGRLHVKEPLKVTVSPRKVKGSVGSQVSLTCSVTGSEEYQLSWYRNGELIYPSNS
IRMTGQSRENLVMAGMAKSDGGAYQCFARHGKMSAQDFVQVILEDGTPKILASFSEKVYN
VNEFVSLSCTVKGTPEPRVTWSLDDEPVIRDSRHRISYYTNAEGHVVSHLNITQTQVPDG
GVYRCICNNSAGTVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYK
DSNLLPYNHRQRAFENNGTLKLFDVQKDVDEGEYTCNVLVQPQLSTHQSVYVTVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNL
TLAHNGNYTCIARNQAAAVEHQSQLIVRVPPKFVVQPKDQDAIYGKAVILNCSAEGYPVP
TIQWEYSKGSGVPQFKPIALNSGFRIEVLVNGSLLIKHVLEEDSGFYLCRVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGEEKRMSCTAHGEKPIMVRWEKEERIINPETSRYVV
SVKEVGDEVISTLQIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVK
DRTIALRWTMGFDGNSPITGFDIESKNKSASWDTAQKTKDVSPQLNQATIIDLHPSSTYN
IRMFAKNLIGKSEASNELTITTDEAAPDGPPQDVQLEALSSQSIRVTWRPPKKHLQNGAI
RGYQVGYREYSSGGNYQFSVISVETTGDNAESLVLDNLKKFTQYGVVVQASNSAGTGPSS
TEVAATSLEDVPSRPPENVQAVATSPEVISLSWLTPPKDALNGNLLGFRVIYWANLPDGE
LGEIRNVTTSKPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVK
AAAASNSVVFVSWLPPLKVNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSRNRQ
YSIWVVAVTAAGRGNASEIITVKPMAEAPARILTFNRTVTTPWMRDIVLPCKAVGDPSPT
IKWLKEINGTPAPVVIDSRRSVHGNGSLVIRTVKAEDSGNYTCVASNSFGSDKIVLNLQV
QVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGNFAISPSERSY
RLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYAKEQELFTSINATRVKLNL
NGWNNGGCPITSFTLEYRAVDAPTWTTAQRTSLTKSYILYDLQEATWYELQMKVSNSAGY
AEKRVKFATLSYDGSTIAPLVKAPNVSEDTSGGGEGLKMMVTISCVLVGIVVIFIGLLVL
RRRRREQRLKRLRDAKSLAEMLMSKNTRPAEPINKQQQTLRMHIDIPRAQLLIEERDTME
TVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSKSNPTAR
RTAKAGPAARNRYASQWTLNRPHPPVSSHTLSTDWRLPTPRVAGSVDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTND
YTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLN
RGMTCSGSSRGTAGSERAAMGQTCLEPQKSRSLKRPSRMAPPTPTEAPQASRDPAAQWQP
GSAATLPHREGSELAQAAKLSTSQESLLDSRGHLKQSSNPYAKSYTLV
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctcttatcttttcccagtgcatcttgaatgttttctgtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacatcggtgccctgtcccgctgcaggcgtgccccctgtctcactgcgctggtacctg
gccaccggcgaggagatctatgatgtgccagggatccgccatgtgcaccccaatggcacc
cttcagatcttccacatccccccttccagcttcagcaaactcatccacgacaacacttac
tattgcacagccgagaacccctcagggagaatcaggagccaagatgtccacatcaaggct
gtcctacgagagccgtacactgtccgggtggaggaccagaaagccatgagaggcaatgtg
gtggtcttcaagtgcattatccctgcctcagtggaggcctacatcactgttgtgtcctgg
gagaaagacacaatgtcaatcaatgctgaaatgtcacggtttctaattacatccactggt
gccctgtatatcctggatgtgcaaatggaagacgggctttacaactacaggtgtatgaca
cgacatcggtacacaggagagacccgacagagcaatagtgcccgtctcattgtctcagat
ccaaccaactcagcaccgcacatactggacagcttcgagcgtcgcgaggtgatgacgaat
catcgagtggagctgccctgcaaggcctcaggtcacccggcgcccaaataccgttggctt
aaagacaaccgaccgctggaaccagacacacgctttagacagagtgtcacaggcctgttg
atagagagagcccagcccagtgacacgggggcatatgtgtgtgaagtgtggaatggctac
ggcaatgctgaggttgttggcaggttgcacgtaaaagaacctctgaaagtaacggtgagt
ccacggaaggtgaaaggcagcgtgggaagccaggtttccttgacctgcagtgtaactggc
tctgaggagtatcagctgtcgtggtaccgcaatggagagctcatttaccccagcaacagt
atccgcatgacaggccaaagcagagagaatctggttatggctggaatggccaagagcgac
ggaggagcctatcaatgcttcgccaggcatggcaagatgtctgcccaggactttgttcaa
gtgatactggaagatggcaccccgaagattctggcttcattcagcgagaaggtctacaac
gtcaacgagtttgtgtcactgtcgtgcacggtgaagggcacaccggagcctagggtaacg
tggtcgctggatgacgaacctgtgatccgggacagtcggcaccgcatctcctactacacc
aacgccgaaggccacgtggtcagccacctcaacatcacccagacccaggtccctgacgga
ggggtgtaccgctgcatctgcaacaactcggcagggacggtttcctaccaggcgcgaata
aacgtaagagggcctgccagcatcagaccaatgaaaaacctcactgccattgctgggcgg
gacatgtacatccactgccgcgtcatcggctacccttactattccatcaagtggtacaag
gactccaatttgctaccgtacaaccaccggcagcgggcctttgagaacaacggcaccctg
aagctgtttgatgtgcagaaggacgtggacgaaggagaatacacgtgtaacgtgctggtg
cagcctcagctgtccactcaccagagcgtctatgttactgttaaagtcccacccaccatc
cacccatttgagtttccccggttctccatcggccagcgagtcttcatcccgtgcgtcgtc
atgtccggcgaccagcccgtcttcatcacctggcagaaagacggccggcctatcccggcc
agcctgggcgtcaccatcgacaacattgacttcaccagctcgctgcgcatctccaacctc
acgctggcccacaacggaaactacacctgcatcgctcgcaaccaggctgctgccgtggag
caccagagtcagctcatcgtccgagttcctcctaaatttgtggtgcaaccaaaggaccag
gatgccatctacgggaaggcggtgatcctcaactgctcagctgaaggctatccagttcct
accatccagtgggaatactccaaaggctccggggtacctcagttcaaacccatcgccctc
aactcaggctttcgcatcgaagttctggtgaacggctctctgctcatcaagcatgtgctg
gaggaagacagcggcttctacctctgtcgggtcagcaacgacgtcggggccgatgttagc
aagtccatgtatctgaacgtcaaaattcctgccatgatcacatcctacccaaacaccacg
ctggccacgcagggagaggagaagaggatgagctgcactgcccacggagaaaaacccatc
atggtgcgctgggagaaagaggaacgcatcatcaacccggagaccagccgctacgttgtt
tctgttaaggaggtgggcgatgaagtcatctccaccctgcagataatgcctacagtgagg
gaggactcaggcttcttctcctgccatgccatcaactcctttggtgaagacagaggaatc
attcagctcacagtgcaagagccgccggatcctcccgaggtggagatcagagaagtgaag
gacagaaccattgctctgcgatggaccatggggtttgatggcaacagtcccatcacgggc
ttcgacatcgagagcaaaaacaaatcagcatcctgggacacggctcagaagaccaaagac
gtctcgcctcagctgaaccaggctaccatcatcgacctccatccctcttcgacttacaac
atccgcatgtttgccaagaacctcatcgggaagagcgaggccagcaacgagctcaccatc
accacagatgaagcagctcccgatggacctcctcaagacgtgcagctggaagccctctcc
tctcagagcatccgggtcacatggaggccgcccaagaagcacctgcagaacggggcgatc
cgcggctaccaggtaggctaccgggagtacagctccggtgggaactaccagttcagcgtg
atcagcgtggagacgactggggacaacgcagagagcctggtcctggataacctgaagaag
ttcacccagtacggcgtggtggtccaggccagcaacagcgccgggaccgggccgtcttcc
actgaggtggctgctacctctctggaggacgtgccgagccgtcctcctgagaacgtccag
gccgtggccacatctccagaggtcatctccctgtcctggctgactcctcccaaagacgcc
ctgaacggcaacctgctgggcttcagggtcatctactgggccaacctgcctgatggagag
ctcggggagatcaggaacgtcacaacctctaagccttcactggagctggacggattggag
aaatacaccaactacagcatccaggtgttggccttcaccagagcaggagacggtgtccgc
agtgagcagatttacacccgcaccaaggaggatgttcctggtcctccagctggtgtgaaa
gctgcagctgcatccaactcagtggtgtttgtgtcctggcttcctcctctcaaagtgaac
ggcatcatcaggaaatacacagttttctgctccaatccacaccctacggtgagcagtgaa
ttcgaagcagctccagatgttttcttctaccgcatccctaacctgagcaggaaccgacag
tacagcatctgggtggtggccgtcactgccgcaggccgcggaaatgccagcgagatcatc
actgtcaaacccatggctgaagctccggctcgaatcctgaccttcaacaggacagtcacg
actccctggatgagggacattgtgctcccctgtaaggcagtcggtgatccgtccccaacc
atcaagtggctgaaggagatcaatggaacccctgctcctgttgtgatagacagccggcgg
agtgtccatggaaatggcagccttgttattcgcacagtgaaagcggaggattctgggaat
tacacttgtgtggccagcaatagctttggttcagacaagatcgtcctcaacctgcaagtt
caagttccacctgaccagcctcgcctcaccgtcaccaagacaaccacaacctcaatcacc
ctctcttggatcccaggagacaacggcggcagctccattcgaggctacatcctgcagtac
tcagaggataacagcgaacagtggggtaacttcgccatcagtcccagtgagcgctcctat
cggctggaaaacctcaagtgtggtacctggtacaagttcactctcacggcccagaacgca
gttggtcctggtcgcatcagtgaaatcatagaagcaaaaacccacggcaaagagcctcaa
tacgctaaggaacaggagcttttcaccagcatcaacgccactcgggtcaagctcaacctc
aacggctggaataacggcgggtgtccgatcacctccttcaccctggagtaccgggccgtc
gatgcgcccacctggaccactgcgcagcgcacgtctcttacgaagagctacattctgtac
gacctgcaggaggccacctggtatgagctgcagatgaaagtttccaacagtgccggctac
gctgagaagagagtcaagtttgcaacgctcagctacgatggcagtactatcgcccctttg
gtgaaagcgcccaatgtgagcgaggatacgtctgggggaggcgaaggtttgaagatgatg
gtgaccatttcctgcgtgttggtggggatcgttgtaatcttcattgggctgctggtgctg
aggaggaggaggagggagcagaggctcaagaggctgagagatgcgaaaagtttggctgaa
atgctcatgagtaaaaacacacgtccggcagaaccaattaacaaacagcaacagacgctg
cgtatgcacatcgacatccccagagcccaactcctcattgaggagagggacaccatggag
actgttgacgacagatccactgtgttgctgacggataacgacttcggagagacacagaag
caaaagtcgtccacggtcacccatactgtccactaccagtccctctcccaagccactggt
ccactggtagatgtatcagatgctaggccaggaaccagtaagtccaacccgactgcccgc
cgtacagccaaagccggcccagctgcccgcaaccgctacgccagccagtggactttgaac
cgcccccacccccctgtctcctcccacactctcagcactgactggcggctgccaacaccc
agggttgcaggttctgttgacaaggagagcgacagctacagcgttagcccatctcaggac
acagaccgagcgcggagcagcatggtgtctacagagagcgcctcttccacctacgaggag
ctggcccgggcctacgagcacgccaagatggaggagcagctgcgccacgccaaattcacc
atcaccgagtgcttcatctccgacacttcctcggagcaaatgacggccggcaccaacgac
tacaccgacagcctgacgtccagcacgccgtccgagtcgggcatctgccgcttcactgct
tccccgcccaagcctcaggacgtcagccgggtcatgaacatggccgtgcccaaggcccac
agaccgggaggcgagctggttcaccttcctccatacctgcgcatggacttcctgttaaac
cggggcatgacctgctcaggctcctccagggggacagcaggcagcgagagagccgccatg
ggccagacctgcctggagccccagaaaagccgctcgctaaagcggccgtctcgcatggcg
ccgcccacgcccacggaggcccctcaggccagcagggacccggcggcccagtggcagccc
ggctcggcggccacgctcccccacagggagggctcggagctggcccaggctgccaagctc
agcacctcacaggagtccctgctggactccagaggacatctgaaacagagcagcaacccc
tacgcaaagtcctacacgctggtataa
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