Xiphophorus couchianus (Monterrey platyfish): 114153579
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Entry
114153579 CDS
T05908
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114153579
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
DSCAM family
114153579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
114153579
NCBI-ProteinID:
XP_027888027
LinkDB
All DBs
Position
11:complement(20220466..20289981)
Genome browser
AA seq
2126 aa
AA seq
DB search
MHGSLMKRGGDMGGAEAPLVSPPCLAGQQGWKYLPGAQSPVQHGDPPGQKNAPHTYQDCQ
QFLKNIPAIYGMWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPA
GGTPSAILRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQA
GKIRSPNIRIKAVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIV
PGNRFSLTSFGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPSESSPTIL
DSFQAGEVYTGQSIELPCIAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDS
GSYACEVTNSFGSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTISWY
RNTEPIVPDQHIFIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPR
IVSSFSERVVNPGEPFSLMCSAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSH
VNVSSPLIRDGGVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVI
GYPYYSIKWLKDGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTV
HVTVKVPPLIQPFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIET
KEFMSSLQISKVTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAG
VLNCSVEGYPPPKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLC
QASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDM
VIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQA
NIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTW
RAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRMTLHGVLKGYR
VVFWSLFPDGGGCCGGRAQWPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAG
DGVRSNVLYIQTREDLPGPPAGIKAVPSSPSSVVVSWLPPLKPNGVIRKYTIYCSSPGSG
QPAPSEYEANPEMLFYRITHLSRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILS
FGGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAVPVTADGQRQILSNGTLVLRSVK
AEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIR
GFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKT
HGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTN
QLFLSELREATWYELKMKACNSAGCGNQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFS
IGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSG
PLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSTASARTLTSDWRTMGSHG
ITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITEC
FISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAN
KSEFCNLPLYMKADPFFRKQGDSLHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQ
QALTLGHSGLGSLGASSSTSTLPQRTLTMPSSNNAATASTSSTSSNPTNSNKVGGSRDSL
LESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagtctcatgaagagaggaggggacatgggcggggccgaggcgcctctcgtt
tcccctccatgcttagcggggcagcagggctggaaatacctcccgggagcacagtcgcca
gtccagcacggagacccgcctggccaaaagaacgcgcctcacacttaccaggattgccaa
caattcctgaaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctg
tactctctccaagaagtacacagtgaggatgtgggctctaccaggctgtactttgtaaat
gcctccctgcagagggtaacctactccagctcagtgggggtgtccctgccctgtcctgca
gggggcacccccagcgccatactgcgctggtacctggccactggcgacgacatctacgac
gtgccccacatccgccatgtgcacgccaacggcaccctccagctgtacccgttctcgccc
tctgcgtacaacagctacatccacgacaacgactacttttgcaccgccgagaaccaggcg
ggcaagatccgcagcccgaacatccgcatcaaagctgttttcagggaaccctacactgtg
cgggtggcagaccaacgctcaatgcggggcaacgtagcagtgttcaagtgcctcattcct
gctgccgtgcaggagtatgtcagtgttgtgtcctgggaaagagacactgtttccattgtt
ccaggtaacaggttctccctgacctcctttggagctctttacatctctgatgttcagaaa
gaggatgccctctccacataccgctgcatcaccaagcataagtacagtggtgagacgcgg
caaagcaacggagccaggctgtcagtaatggacccgagtgagtcctcgcccaccatcttg
gacagtttccaagccggggaggtgtacaccggccagagcatcgagctcccctgcatagcg
ggcggctacccgagccccaccgtgcgctggctgaaagatggtcggccgctgccctcagac
gcccgctggacccggcgcttgactgggctgaccatcagcgacctgaggcaggaggacagc
ggcagctacgcctgcgaggtcaccaacagttttggctccaaggaggtgtctggacagctt
cacgtaatagatccactgcgagtgacgctgtctcccaagaacctgaaaacaggcatcagc
agcaccctgttcttcacctgcactgtggagggttctccagaatacaccatcagctggtac
aggaacactgagcctattgttcccgaccagcacattttcatacagggacaacacaacgac
acgctgcagatcactgcagctcagaagttccactctggagcctaccaatgctttgcttcc
cgaaagggccacacagctcaggacttttccattatactcttagaggacggtactcctcgt
attgtgtcttccttcagcgagcgggtggtgaaccccggcgagcctttctccctcatgtgt
tctgccaaaggagccccaccgccctctatcacctggactctagacgatgagcccgtggtg
cgagattctacctacaagaccagccagtacaccctgtccgacggcctgaccgtgtctcac
gtcaacgtcagcagtccactcattcgagacgggggagtgtatcgttgcgtcgcacgaaac
tcggccggtagcgccgagtaccaagcgcgcataaacgtaagaggtccgcctcgaataaga
cccatgcgagatatcacagcggtggcaggcagaaacacatatataacatgccgcgtgatt
ggctacccgtactactcgatcaagtggctgaaggacggcatgcagctgcctgataatcat
cgtcaagtggtgtttgagaatggcaccctgaggcttacggacgtgcagaagggcgccgac
gaagggacctacttgtgtagcgttctgatccagccccaagtgtcaatcaaccagacggtc
catgtaacggttaaagtgccgccgctcatccagcccttcgacatcccctctacctcagtg
gggaagctcatgtacatcgcctgcgtggtgtcgtctggggacatgcccatacgcatcacc
tggcacaaagacggccagctcatagtgccaggctctgcctctggcgtcgcaatcgagacc
aaagagttcatgagttccctgcagatctccaaggtgacactgaagcacaacgggaactac
acctgcatcgccagcaacgccgcagccaccgtcagctgggagagacagctgattgtcacc
gtgccgccacgttttgtggttcagcccaacaaccaggactgcatttatggaaaagcaggc
gttctgaactgctcggtggagggttatccacctccaaaagttatgtggaaacacgccaaa
ggtgttggaaacccacagcagtaccaccccgtccccctcaccggccgcatccagatcatg
tcgaacggctccctgcttatccggcatgtccttgaggatgacagagggtactacctctgt
caggcctccaacggcgttggctcagacatcagtaaaagcatgatcctcactgtcaagatt
cccgccatgatcaccagccaccccaacaccaccatggcgaggaagggccagaccaaggag
ctgaactgcacagcacggggcgagcagcccattattatccgctgggagagaggagacatg
gtcattgatgcagagagaaacccccggtactccatcactatcaacaagaagggagatgaa
gtcatctccaccctgaagctgaacccagccgagcgaggagattcagtcttcttctcctgc
cacgctatcaactcctatggagaaggccgagggctcatccaactcacagtgcaagaacca
ccggatccccctgagctggaagtgagggaggtgaaggacagaagcatgaacctgcgctgg
atccaaaggtttgacggcaacagcatcatcaccagctatgatattgagtacaagaataaa
tcggactcttgggatcacatgtacacaaccaggaacatctcccctacaaacaatcaagcc
aacattgtggaattgcatccggcttgcgtttacagcatccgcatgtattcgtataacaaa
atcggacgcagcctccctagcaaagagctcactatcagcactgaggaagcgccacctgat
gggcccccgatggatgttgtcctccaaccgatgacgtctcagagcattcgagtcacatgg
agggctcccaagaaggaactgcagaatggggttatccgaggttatcagatcggctacaga
gagaacgggcctggcagcaacggccagtacagcatcgtggagatgaaagcaacgggggac
agcgaggtgtacaccttggacaacctgaagaagtttgctcagtatggcgtggtcgtccag
gctttcaacagagctggaactgggccgtccagcaccgagatcaacgccaccacactggaa
gacgtgccgagcgagcccccacagaacgtgagagcaatctcggtgacgtcggatgaggcg
gtgatcacgtggtcggagcctccgcgcatgacgctgcacggcgtgctgaaaggctaccgg
gttgtgttttggtccctcttccccgacggaggtgggtgctgtgggggccgggcccagtgg
ccgatgcagaaatggggagagatgcagaacatcaccaccacacgcgaacaggtggagctg
cgagggctggagaaattcaccaactacagtgttcaggttctggcctacacacaggccggt
gacggagtccgcagcaacgtcctgtacatacaaacgcgcgaggaccttcccggtccacca
gccggcatcaaggcagttccttcctctccaagcagcgtggtcgtgtcctggttaccacct
ctgaaaccaaatggtgttatccgcaagtacaccatttactgctccagtccaggatctggg
cagccggcgcccagcgagtacgaggccaaccccgagatgctcttttaccgtatcacgcac
ctcagccgcggcaaacagtaccacatctgggccgcggccgtgacgaccgccggccgcggc
aacatcagctcaaaggtcacggtggagcctgctgggaaagtcccggcaaaaatcctctcc
ttcgggggcacggtgaccacgccctggatgaaggaagtccgtcttccctgcagctcggtc
ggcgagcccgcccccaccattaaatggaccaaagacagcgaggattctgccgtcccagtg
acggccgacggtcagcggcagatcttgtccaacggcacgctggtgctacgttcggtaaaa
gccgaggattctgggtactacacctgcacggcgactaacaccctgggctttgacaccatc
attgtgaatctggtggtgcaagttcctcctgaccagcctcgtctgactgtctccaccacc
tccacctcctccatcaccctggcttggattccaggggacaatggaggaagctctatcaga
ggatttgtgctgcagtattctgtggacaacacagaggagtggagggatgtgttcatcagc
tccagcgagcgctccttcaggctggacaatctgcgctgcggaacgtggtacaaagtcaag
ctggcagccaagaacagcgtcggctcgggtcgcatcagtgagatcatcgaggccaagacg
cacggaagagagccggtgtttaacaaggaccagccgctgctcacccacatcaactccacc
catgcgggactcaacctgcagggctggaccagtggcggctgccccatcactgacctaatg
ctggacttcaggcctaaaggcacctgggcctggcagagccttaaggccaactccaccaat
cagctgttcctcagcgagcttcgcgaggccacatggtacgagctcaaaatgaaggcctgc
aacagcgctggctgtggaaaccagacctcccagtttgctaccaccgactatgatggcagt
acgatcccccccattaaatctgcccgtggagagggagacgacgtaaaaaaactgttctcc
atcggctctcctgtcatcctggtcactctgggcgtggctttgctcttcatcatccgtaag
aaacgcaaagagaagaggcttaaacgtctcagggatgctaagagcctggctgagatgctg
atcagcaagaacaatcgcagcatagacacgccggtgaagggccctccgcaagggccgagg
ctccacatcgacattccccgagttcagctgctcatcgaggacaaggaaggcatcaaacaa
ataggagaggacaaggcagcggtgccggtgacagacaccgagttcagccagtcggtgaat
ccccagaacttctgcacgggcgtgtccctgcaccaccaggccctgatccagaactcagga
cctctgattgacatgtcagacatccgccctggcacaaaccctgtgtccaggaagagcata
aagtccgctcacagctccaggaacagatactccagccagtggacactgagtcgaccgagt
cagtccacagcttcggcgcgaactctgacgtccgactggcggacgatgggctcccacggc
atcaccgccaccgagagtgacagctacagcgccagcctctctcaagacacggataagggt
cgtaacagcatggtgtcgacggagagcgcctcctccacctacgaggagctggcccgagcg
tacgagcacgccaagctggaggagcacctgcagcacgccaagttcaccatcacagagtgc
ttcatctccgacagctcgtcggaccagatgaccaccggtaccaacgaccccgcggacagc
atgacctccctcagcacgccgtctgagccgggcatctgccgcttcaccgcctcgccaccc
aaaccgcaggactacgaccgcgggaagaacgtggcggtgcccattccccaccgggcaaac
aaaagtgagttctgcaatctacccctttacatgaaggcagacccattcttccgcaagcaa
ggggactctctgcatgacccgtgtccagcagtgccgccacgggaagcctcgatccgcagc
ctgacgcagcgggcgtaccacacccagggccgtcacaagactctagacccggccaagcag
caggccctgacgctgggtcactccggcctgggcagcctgggcgcgagctccagcacctcc
accttgccccagaggactctcaccatgcccagctccaacaacgcagcgacggcctccaca
tccagcacgagcagcaaccccaccaacagcaacaaggtgggcggctccagagactcgctg
ctcgagagcagctcctcggccctggggaggctgcagaagcagagcgtgggggcctactcc
aagtcctacacgctggtgtag
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