Xiphophorus couchianus (Monterrey platyfish): 114153635
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Entry
114153635 CDS
T05908
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114153635
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114153635
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
114153635
NCBI-ProteinID:
XP_027888110
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Position
11:complement(19845771..19856703)
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AA seq
1030 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPALLSAIQEGKIEMLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPKVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYEIVTMLTQKGHGIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSSDAMLSAFSLSRELRRLSQKEPEFKPQYL
DLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDALDQEAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGKLAGWRGSRTAWKLLVSVGIFLTMPFLCLVYWIAPKSKAG
KMVRIPVIKFLLHSASYLWFLITLLGESIIMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMIVLSMYLASFALRVLIMVKGHFLCHDQSNSDECIYF
TQTGRDNWRQEDPQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFNFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAVFYILRGFFKCLCCCCNFNSEQKYPPVASMSNDKGTEDNLPYRQQVIRAL
VQRYIESARREFEETKRKDIGNRITELNKAVSRMHLEMKGIQQLLMTDGHAANDALTKDG
SSVLGKYIIGAKNNFRGFNSSQDDKSTSLKVTVHQKEEGADERKADSEARQDTDAQLDQV
DESEEEELGKAADCEVVKMEEGRAKTELGDWKETENTELVEVSKGDDGVKEDFSEGMGFI
RVEGKVKAESIQGKEAKREGDIDPKVTENLAEIRPEHIESSKTSFEKTDAKKTINKFNNM
ELKEKPDEAGWMKGKKYGGNVVERSHVTKGDEKTGNKKVIQSPTGSSSSNDTGFGSQEGE
GSIDGTPVKP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgagagatcatgaacaagaagatgcgcttccct
ccggcgctcctcagtgccattcaggagggaaaaatagagatgttgtgtggactgctgaag
actggggatggcatcattcgccagctggatgagtcggaggaccgccagtggagggaggct
ctcaacctctccatccgcctgggcaatgaggatgccatggatgcccttctgcagggagta
aagtttgacttccggcagattcacgaggctctgctggtggctgtggacacaaaccagccc
aaggtggtgaaacgcctgttggaccgcctggaccaggagaaaggcaacaagatggatgta
cgatccttctctcaagccatctttgaccggtccattgacaactcacagtttgcccctggt
gtcacacctctgacacttgcctgtcagaaagatctttatgaaatagtcaccatgctcact
cagaaagggcatggcatcccctggcctcataagatatcctgcgcctgtctggagtgtcgc
aacggccggcagtatgacctgctgaagttctccttgtctcgcatcaacacctaccgtggc
atcgccagccgtgcctatctctccatcacctccagcgatgctatgctcagtgccttcagt
ctcagcagagagctccgcaggttgtcccaaaaagagcccgaatttaagcctcagtacctg
gacctggagcaactctgtcaggagtttgccgtcgagttactgggcatgtgccgtaaccag
agtgaagtcaccacaatcctgaacagctgtggagacgagagccaggacgctttggaccag
gaggcctttgaggagggaatccccaacctgtcacggctgaggcttgcagtcaactacaac
cagaagcagtttgtggcccatccgatctgtcagcaggttctttcttccatttggtgtgga
aaactggcagggtggagaggcagcaggacagcctggaagctcctcgtctctgttgggatc
tttctaaccatgccttttctttgcctcgtctactggatagctccaaagtcgaaggcggga
aaaatggttagaatccctgtgatcaagtttctgcttcattctgcgtcgtacttgtggttt
ctcatcacattactcggagaatccataattatggagatgtatcgtgacaaatttgcatcc
cgtcagcagaatattctgcacagctcattccacatggtgtgggtggttggattcttctgg
tacgagtgtaaggaagtctggattgagggcttgcgaagctacttcctggactggtggaac
tgcttggacatgattgtgttgagcatgtacttggcatcctttgccttacgtgtgctcatc
atggtcaaaggtcacttcctgtgccatgatcagagcaacagtgatgagtgcatctacttt
actcagactggtcgtgacaactggcgccaggaggaccctcagctcatctccgaggtgctg
tttgcagtaaccagcatgttgagcttcacccggttagcctacatcctgccggcccacgag
tccctgggaacgctgcagatctccatagggaagatgattgatgacatgatgaggttcatg
tttatactgatgatcatcgggacggccttcctctgcggcatcaacaatgtctacgttcct
tatgtcatctccccacatcttggcaggtttaatgagaccttcaacttcttattctggacc
atgtttggtgtggccaaccaggactatgtggacatgccgcagtttgttttagcggagttt
gtaggaaggatcctgtacggcatcttcaccctcgttatcgtcattgtcctgctcaacatg
ctgattgccatgatcacaaactcctttcagaagattgaggacgatgcagatgtggagtgg
aaatttgcccggtctaaactgtacctgagctacttcagagagggcctcaccatgcctgtg
cctttcaatatcatcccttctcccaaagctgtgttttacatcctgagggggttttttaaa
tgtctctgctgttgctgcaactttaactcggagcaaaaataccctcctgtagcctctatg
tctaacgacaaaggaacggaggacaacctgccttaccgacagcaggtgatcagagctctg
gtgcagcgctacatcgagtcagctcgcagggagtttgaggagaccaagaggaaagatatc
ggtaaccgaatcacggagctgaacaaggcggtctccaggatgcatcttgaaatgaaaggg
atccagcagcttctgatgactgatggacacgctgcaaacgacgcactgaccaaggacggt
tcttctgtgcttgggaaatacatcatcggtgccaagaataacttcagaggttttaacagc
agccaagatgacaaaagcacatcgcttaaagtgacagttcatcagaaagaggaaggggcc
gatgaaaggaaggccgattcagaggcgcggcaggacacagatgcacaattggatcaggtg
gatgaaagtgaagaagaagaattgggtaaggcagcagactgcgaggtggtgaaaatggaa
gagggacgagcgaaaacagagcttggggattggaaagaaactgaaaatacagagcttgta
gaagtaagcaaaggggatgatggagtaaaagaggacttctcagaagggatgggttttatt
agagtagaaggaaaggtgaaagctgagagcatacagggcaaggaggctaaaagggaagga
gatattgaccccaaggtgacggaaaatcttgcagagatcagacctgaacacatagagagc
agcaaaactagttttgaaaaaacagatgcgaagaaaacgataaacaagttcaataacatg
gagttgaaagaaaaaccagacgaggcaggatggatgaagggaaaaaagtatgggggtaat
gttgtggaaagatctcacgtaaccaagggggacgagaaaaccggaaataagaaagtgatt
cagtctccaacagggagcagcagctccaacgacaccggctttggttcacaggaaggggaa
ggatcgattgacggcacaccagtaaaaccatga
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