Xiphophorus couchianus (Monterrey platyfish): 114153744
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Entry
114153744 CDS
T05908
Symbol
bbx
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114153744 (bbx)
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114153744 (bbx)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114153744
NCBI-ProteinID:
XP_027888296
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Position
11:31995349..32037224
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AA seq
851 aa
AA seq
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MTGCASFVLIIHSAFPSFFLQCSSTMKSGGRGKAQPVEGVTGKRPKRKCLQWHPLLSKKA
SEFSEEEEEEDEEELGKAGLCSEDQDSQVHNVSTTEEAEEDSNEHRARRPMNAFLLFCKR
HRSLVRQEHPRLDNRGATKILADWWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTT
SKPLKSSSYQHVSCPRKKVWSFSCNSSKDSTAKNVPKSDSLHQLNFAMADPTKMGGLSML
LLAGEHALTNREISPSTKSTLPDIAIKGSSFSEETKEMLSQTIPNRVPDIIDSRMKTGLS
LVEESSLSGTLEGKPYRQSALFQLAEMCLASEAGKIDSIVSQPDDNCSTATLKQISMKPG
VKEERDNSDCCSPSHRSPSPPSPSSGTSTPTAQHTSQSGCVKKKNKKYEEVKSNDIPCSE
KRVGTNCQHLESNVDSTIEAVARGAWIDKEDKSKKKTPPSFISRSSGLPQKKTKTKVKTL
VKAKEEELEDSSKLQGSSDGERKKVVPGIEAKIETESVNSESTGLQGCMPVSPQLHCGQS
PVKPKEEDKEKHKEKEQQKASDTTCELNTHNHGSRKSERSCKGALYKTLVSEGMLTSLRA
NIDRGKRGGLRAFDHESNWSQDSWTVSHLGPSNTKKLKKSKSKEESSQSLGKLEEEFEKK
FNSLPQYSPITFDKKGTAVAKKKKTDCSSSVDESSKSPKVEQSNCWQLDSVSKAQPSASM
FLDIHGASSMEMLVGSQKRKARKSRITHLVRTADGSVSAAEENKAGDLNQEQDKKPLNQQ
NLCNEKRCYSSPTAEETGRNTLPPELPAFFSLAALAEVAAMENVHRGQRNLAQSQKKELV
QTPVLISCADQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctgtgccagctttgtcctcatcattcattcagcatttccatcattttttctt
cagtgcagtagtaccatgaagagtggaggaagaggtaaggcacagcctgttgagggggtc
actggcaaaagacctaaacgtaaatgcctgcagtggcaccctcttctttccaagaaggct
tcagagttctctgaggaagaggaagaagaagatgaggaggagctggggaaggcagggctg
tgcagtgaagatcaggactcccaagtgcataatgtaagcacaacagaggaagctgaagaa
gactctaatgaacaccgggcacgtcggcctatgaatgctttcctcctcttttgcaagcgg
caccgttctctggtgcgacaggaacatcctcgtcttgacaaccgtggggccacaaaaata
ttggctgactggtgggctgtgctggagcccaaggagaagcaaaaatacactgatatggcc
aaggagtataaagatgcctttatgaaggcaaacccaggctataagtggtgtcccactaca
agcaagccactcaagagctcttcctatcagcatgtcagctgtcctcgcaaaaaggtgtgg
tccttctcctgcaactcatccaaggactctactgccaaaaatgtgcccaaaagcgacagt
ttgcaccagttgaactttgccatggcagaccccacaaagatgggaggcctgagcatgctg
ctgttagctggtgaacacgccctcacaaacagggagatctctcccagcactaaatctaca
ttacctgacatagccattaaaggaagctccttttcagaggaaactaaagagatgttgtct
cagacaattcccaacagagtgcctgatattattgacagcaggatgaagacagggctttcc
ctggtggaagagtcttccttgtcaggcacccttgaaggaaaaccatacagacagtcagct
ctcttccagcttgcagagatgtgtttagcatcagaagcaggaaaaatagactcaatagtg
tctcagcccgatgacaactgctccacagcaacactcaagcaaatatccatgaagccagga
gttaaggaggagagagacaactctgactgctgtagtccttctcatagatcgccctcccct
ccatctccttcctctggaacatccacccccactgctcagcatacaagccaaagtggatgt
gtcaaaaagaagaacaagaaatatgaggaggtgaagtctaatgacatcccatgttcagaa
aagagagtgggcacaaattgtcagcacttggaatcaaatgtggacagcaccattgaggca
gtggccagaggagcttggattgacaaagaggataaatccaagaagaagacccctcccagt
tttatcagtagaagctccggtctgccacaaaagaaaactaagaccaaagttaagacactg
gttaaagcaaaagaagaggagttggaagacagcagcaagctgcagggatcctctgatggg
gagagaaagaaagtagtgcctggcattgaggccaagattgaaacagaaagtgtaaatagt
gaaagcacaggccttcaaggctgcatgccagtgtctccccagctccactgcggccaatcg
ccggtgaagcccaaagaagaggacaaggagaagcacaaggagaaagaacagcagaaggct
agtgacacaacctgtgagctgaacacacacaaccatggctccagaaaatccgagcgaagc
tgtaagggtgccttgtacaaaactcttgtgtctgagggaatgctaacttcactgagagcc
aatatagacagaggtaaaagaggtggcttacgcgcttttgatcatgagtctaactggagt
caggacagctggacagtttcacacttgggaccaagtaataccaagaagctaaaaaagtcc
aagtccaaagaagagtcttcacagagcctgggaaaactagaagaagagtttgaaaagaag
ttcaacagcctgccacagtacagtccaatcaccttcgataagaaggggacagctgttgcc
aagaaaaagaaaactgactgctcctctagcgtagatgaatcctccaaatctccaaaagtg
gaacagagtaactgctggcagttggattcagtttcaaaagctcagccctctgcttccatg
ttccttgacatccatggtgcctccagcatggagatgctggttggcagccagaagaggaag
gctaggaagtccaggattacacacttggtgcgcacggctgatggcagtgtttctgcagct
gaagaaaacaaagctggggatctaaaccaggaacaggataagaagccattaaaccaacag
aatttatgcaatgaaaaaaggtgctacagcagtcctacagcagaggagactgggcggaac
accttaccaccagagttacctgctttcttcagtttggcagcccttgctgaggtagcagcc
atggaaaatgttcacagaggccagagaaacttagctcaaagccagaagaaagaacttgta
caaactccggttctcatatcctgcgctgatcagtga
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