Xiphophorus couchianus (Monterrey platyfish): 114153962
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Entry
114153962 CDS
T05908
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114153962 (rnf180)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114153962 (rnf180)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114153962 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
C1_2
Motif
Other DBs
NCBI-GeneID:
114153962
NCBI-ProteinID:
XP_027888460
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All DBs
Position
12:12495145..12505646
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AA seq
486 aa
AA seq
DB search
MSSRMGVSITGGASRNRENENEDPSEGNGSNEGHNQRMRPTTSWLSDADQAGQHLAKPAL
SGRKARRKTCPEDKQGRRGDRNQERDEERRFRGKDKGQELSRRMETVCADQVQDEPMRGT
SECFSSSNSEMQLKTIFEAGEPSNHSERQHNSLRSQAASFTQTTTTNLKSQSGRPAVQSR
FTHPSSQDPLSRDLYPFWAEVRTERPSQYPLSQTQISVSEDEEEQDENKEAIEEGCGVIE
VTGRAMYSTETPPCMASGERRMSKREKNRIESLRRRRREKWRPSQQPETTQSSTETPTTT
SSCSCSSTEDEETLSMRDKEGFICAVCLDVYFSPYMCHPCNHIFCEPCLRTLAKNSPTNT
PCPLCRTIITHVFFQKELNQTAKTFFPKEYLSRKQNFQRAPCSKWPLPSCRKLFRIFRGF
QRQSTPSVRRQFPHRGGFPLDTIDFEDDSRGWRFDMDMVIIYIYSVNWVIGFFIFCFLCY
LFFPSF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgcatgggagtgtccatcactggtggcgctagcagaaacagagaaaatgag
aatgaagatccgagtgaaggaaacggcagcaatgagggtcacaatcaacggatgaggccg
acgacatcttggctgagtgatgcagatcaagctggacagcatctggccaaacctgccctg
tctggaagaaaggcacgcagaaagacctgtcctgaagacaaacaaggaagaagaggggac
agaaaccaagaaagggatgaggagagacgcttcagaggtaaggacaaaggtcaagaacta
tctagaaggatggaaacagtatgtgcagatcaagtccaagatgaaccaatgagaggaacc
tctgaatgcttttccagcagtaactctgaaatgcagttaaaaaccatttttgaagctgga
gaaccatcaaatcattcagaaagacaacataatagtttgagatcgcaagctgccagcttc
acccaaactacaacaaccaatttaaaatctcagtctggacggcctgctgttcaaagccga
tttactcatccgtcatcacaagaccctttatccagagatttatatccattctgggcagaa
gtgagaacagagcgaccatcacaataccctttgagtcagacgcaaatctcagtgtcagag
gatgaagaagagcaagatgagaacaaggaagccattgaagaaggctgtggtgtgatcgaa
gtgacgggtcgagccatgtactccacagagacaccaccttgtatggcttcaggagagagg
aggatgagtaaaagagagaaaaacaggattgaaagtctgagaaggaggaggagggagaaa
tggagaccaagtcagcagccagagaccacacagagttcaacagagacccccactaccacc
agcagctgcagctgcagcagcactgaggatgaagaaactctgagcatgagagacaaagaa
ggtttcatctgtgccgtgtgcttggatgtgtacttcagtccttacatgtgtcacccatgc
aaccacatcttctgtgagccctgtctgaggacacttgcaaagaacagccccaccaatacc
ccctgcccactctgcagaaccatcatcactcatgtcttcttccaaaaggagctgaatcaa
acagcaaagacattcttccccaaggaatacctttccagaaagcaaaactttcagagagca
ccttgttcaaagtggcctctcccaagctgcaggaagctcttccgcatctttcgaggtttc
caaaggcagtcaaccccaagtgtgagacgccagttcccccatagaggaggattcccactc
gacactatcgactttgaggatgactctagaggctggcgtttcgacatggacatggtcata
atctacatctactcagtcaactgggttattggatttttcatattctgcttcctttgctat
ttattctttccttccttttga
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