Xiphophorus couchianus (Monterrey platyfish): 114154027
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Entry
114154027 CDS
T05908
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114154027
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
114154027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
TFIIA
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
114154027
NCBI-ProteinID:
XP_027888574
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Position
12:14394939..14398716
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AA seq
330 aa
AA seq
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MLSHADLLDARLGELSSLNSGPKLQWMKDAAELLGHREALKCRLGGGVPDQGHPGDMAPG
SDSVEGTTLLPGEDITTVGSNSAGMPVNGKQEQEKQQQQQQQQQPQQSSGQSASQQKQKR
HRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTT
NVFRAPGTLLPTPGLPQFSAAAAMENSLCSFHANDSRWATGMPGVSQLQLPPALGRQPGM
AQSLSQCSLGPGPPPNSMGLSNGLSSNGSGLQSHLYQSPFPGMSASLSGPTNVSGSPQLC
SSPDSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcacgccgacctcctggatgctcggctcggtgagttatcatcactaaactcc
ggcccgaaactccagtggatgaaggatgctgcggagctcctcgggcatagagaagctctc
aagtgccgactggggggtggggttccggaccaggggcatccgggagacatggcccctggt
tcggactccgtagagggaaccactctcctgccgggggaagatatcaccaccgtggggtcc
aactctgctggcatgccggtgaacgggaaacaggagcaggagaagcagcagcagcagcag
cagcagcagcagccacagcagagctccggtcagtccgccagccagcagaaacagaagcgg
cacaggacgcgcttcaccccggcgcaactcaacgagctggagcgcagtttcgccaagacc
cattaccccgatatctttatgagggaggagctggcgctaaggatcggcctcaccgagtcc
agagttcaggtttggttccagaacagacgcgctaagtggaagaaaagaaagaagaccacc
aacgtgttccgcgccccagggacgctgctcccgacgcctggcctgccgcagttctccgca
gcggccgcaatggagaacagcctgtgctcgtttcacgccaacgactcgcgctgggccacc
gggatgcccggggtctcccagttgcagctcccgccggccctgggtcgtcagccgggcatg
gcgcagtccctctcgcagtgcagcctgggtcccggtccgccgccaaactcaatgggcctc
tctaacggcctgtcctccaacggctccggcctgcagtcccacctctaccagtcgcctttc
cctggaatgtcggcgtccctctccggccccacgaacgtatcgggctccccgcagctgtgt
agctccccggacagtgatatgtggagagggacaagcatcgcgtcacttaggcgcaaagcg
ctggagcacacagtgtcaatgagtttcacttag
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