Xiphophorus couchianus (Monterrey platyfish): 114154053
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Entry
114154053 CDS
T05908
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114154053
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114154053
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
114154053
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
114154053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
114154053
NCBI-ProteinID:
XP_027888614
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All DBs
Position
12:30120063..30126831
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AA seq
1331 aa
AA seq
DB search
MGGQLWLCVGLLALFLQAGSCLNRCRMGYSLCKDGLECISYNHVCDGEEDCKDGSDEQNC
EAGCSADQFQCAHGKKCIDKDQVCDGVPQCQDRSDEQQCRKHPEDCAHHCDEKSHCLPAN
FICDGEKDCLDGTDEANCEDQEEAGTIAGPTPAPSGQSRPLRCGLGSQMCKDKSDCVHYN
HVCDGEPDCRDGSDEEDCISECGTDQFQCTHGRKCIERSKVCDGEPQCQDRSDELDCAKR
MEGCAHLCDENSRCVPDSFLCDGERDCSDGSDEATCADVQCSSTEFKCLSGQCVLASMRC
DGHPDCWDRSDEDGCTKPPVCTTKHRCPHSKECLVQEWLCDGDQDCKDGSDEKDCPVTPV
SCGAFQWSCKSKTQCIPTVWRCDKIKDCDDGSDETECGMGTCLPHEFQCGSQECLDPVLV
CNGITNCADGSDEGGSCQIACTVADRCTQGCHSTPQGPRCRCTAGYRLMEDGQTCADVDE
CDDQAQSVCSHLCINAAGSYKCECQPGFIMEADEYQCKITGEPFLLASVQTELYMYGLRT
GSLDVLSSSAKRAILSIDYDWRDQKVFWVGVDTETIRWSSMDQKTTGILTKGVRADSVAV
DWLARNLYWIDGVKSQIVAISLTKASVKSLDQSIILDEELDQPRSLALLPQKGLMFWTEI
GNLVKIERAGMDGSERKAIVNTSLGWPGGITVDVLSERVFWTDERLNAIGSSTLDGDNVK
IFQLKETTNPFSVAVFNDLLYWSDAKRRVVQAVDKLSGKNRQVILKRPGQPFAIKIIHPI
MQMDTESPCKKMACSHMCVLAPRRKAVCKCPSGLSLAEDGLLCSSLPKSTFLLLLSPPTV
TKIYFQAQQATELKGWPEHFPITIPGVGDAKIMDYSAHDNTLVLTDASATSIKSFKLRNS
VLVAKGQILKLLDDQITAMALDWVTLNIYWSSNKQSRLQVTSKTGAYTAILIKDGIAGVG
SIALHPKSGQVCFTNLNLKDAGSKATVECAYMDGGNRKVVWKDAVQPTSLVFSSTGDTIY
WANAGMGKISLVKTDGSGYKELETGDGLTAVALGDMPIWMTVGDMTRLWYREDQQQKLWF
EVGTKVLGLKAYSNSTQSGTNQCAANNGNCWHLCLATPTGRTCKCAHDFNAKDTNCSTDQ
SCSAGGRICLDQTCLLAEKFCDGHADCADHSDENCADAKQQSETKVSTPSTPTLHTPSSK
MNPGNAVEENHEVLEAAECRQNRCSGKGHCVKIDGVTTCKCSKGYSGVSCQDIAPKGMKG
PIIYGAAGLCGVVLIAVMAVVLKKNVSRGGRPDATVETSMSELEKKVETTTGAQNAQATS
EKKEGPVSSVD
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtcagttatggctttgtgtgggcttgctggcactgtttttacaagctggaagc
tgtcttaatcgttgcagaatgggatatagtctatgcaaggatggcttagaatgtatttcc
tacaaccatgtgtgtgatggagaggaggactgcaaggatggttctgatgaacagaactgt
gaagcaggatgcagtgctgaccagttccagtgtgcccatggtaagaagtgtatagacaaa
gatcaggtatgtgatggtgtacctcagtgtcaggaccgctcggatgaacagcaatgccgg
aaacaccctgaagactgcgctcaccactgtgatgagaagagccactgcctgcctgcaaac
ttcatctgtgatggagagaaggactgtctggatggcaccgatgaggcaaactgtgaggac
caagaggaagctggaacaattgcaggacctacaccggccccttccggtcagtctcgtccc
ctcagatgtggtttgggctcccagatgtgtaaagacaagtcagactgtgtccattacaat
catgtctgtgacggagaaccagactgcagagatggctcagatgaggaagattgtatctca
gaatgtggaactgaccagttccaatgcacccatggaagaaaatgtattgagagaagtaaa
gtgtgcgacggcgagccacaatgccaggaccgctctgacgaacttgactgtgccaagcgc
atggagggttgcgctcatctgtgtgacgaaaacagccgctgcgtccccgacagtttcctg
tgtgacggggagcgggactgcagcgacggcagtgacgaggcaacctgtgctgatgtgcag
tgcagctctacagagtttaagtgcctcagtggccagtgtgttttggcctcaatgcgttgt
gatggtcaccctgactgctgggatcgctcggatgaggacggctgcaccaagccaccggtc
tgcacaaccaaacatcgctgtcctcacagcaaggagtgcttggtgcaggagtggctctgt
gatggagaccaggactgcaaagatggctcagatgaaaaggattgccctgtgacaccagtc
agctgtggtgccttccagtggtcttgtaaatcaaagacccagtgtattcctacggtctgg
agatgtgataagattaaagactgtgacgatggtagtgatgagacggaatgtggaatggga
acatgcctccctcatgagttccagtgtggcagccaggagtgtctggatccagtcctagtc
tgtaatggcattactaactgtgcagatggttcagatgaggggggcagctgccagattgcg
tgtactgtagctgaccgctgtacacagggctgccacagcacaccccagggaccgcgctgt
cgatgcacagcagggtacaggctgatggaagacggtcaaacatgcgctgatgtagatgag
tgtgacgaccaggcacaaagtgtgtgcagtcatctgtgtattaatgcagctgggtcatac
aagtgtgagtgccagccaggatttataatggaggcagatgaataccaatgcaaaatcaca
ggcgaaccattcctgttggcatctgtccagacagagttgtacatgtatggtttgcgcact
ggaagcctagatgtcttgtcttcatctgccaaaagggcaatcttgtctatagactatgac
tggcgagaccagaaggtcttctgggttggtgtggacactgaaacgatcaggtggtcttct
atggaccagaagactacaggaattctcactaaaggtgtccgggcagattctgtagctgta
gattggcttgcaaggaacctgtactggattgatggtgtaaaaagtcagattgttgccatc
agcctcacaaaagcatctgtcaagtcactggaccaaagcatcatcctggatgaagagttg
gaccagcctcgctctctggccctactaccacaaaaagggctgatgttttggacagaaatt
ggcaacttggttaagattgaacgagctggcatggatgggtctgagaggaaggcaatcgtg
aacaccagtttgggctggccaggtggcattacagtagacgtcctttcagaaagggttttc
tggacagatgaacgactgaatgcaattgggtcttccacgctagacggtgataatgtgaag
attttccagctgaaggagactaccaatcccttttctgtggctgtattcaatgacttgctt
tactggtctgatgcaaagaggagagtggtgcaagctgttgacaaactctctgggaagaac
aggcaggttatcctgaagagacctggccaaccttttgctattaagatcatacatccaata
atgcagatggacactgagagcccatgcaagaagatggcctgttcccacatgtgcgttttg
gcaccaagacgcaaggctgtgtgcaagtgtcccagtggcctgtctctggctgaagatggt
ctgctctgttctagtctgcccaaatcaacattcctgctgctgttgtcgccacctactgtc
acaaagatctattttcaagcccaacaggcaacagagttaaaaggctggcctgagcatttt
ccaataacaatccctggtgtaggtgatgcaaagatcatggactacagcgcacatgacaac
actctggtcttgacggatgccagcgcaacttcaataaagtccttcaaactgaggaactcg
gtcttggttgctaaagggcagattctcaaactgctagatgaccaaatcactgccatggcc
cttgactgggtgacccttaatatatactggagcagcaacaaacagtcccgactgcaggtt
acgtcaaaaaccggggcatacacagccattctaataaaagatgggattgctggagtgggt
tccattgcccttcatcctaaaagtgggcaagtttgctttaccaatttaaatctgaaagat
gctggcagcaaggccacagtagaatgtgcttacatggatggcggaaaccgaaaagtcgtg
tggaaagatgcagttcaacccacatctctagtcttttccagtactggggacacgatctac
tgggctaacgcaggaatggggaaaatcagtcttgtcaagactgatggctctggatacaag
gaactagagactggtgatgggctgactgccgtagctcttggtgacatgccaatctggatg
actgtcggtgatatgaccagactctggtacagagaagatcagcagcaaaaactatggttt
gaggtgggcacaaaagtacttggcttgaaagcctacagcaattctactcagtcaggtacc
aaccagtgtgcagcgaacaatggcaactgttggcatctgtgcctcgccaccccaacagga
cggacgtgcaaatgtgcccatgacttcaatgcaaaagacacaaactgcagcactgatcaa
agctgctcagctggtggtagaatatgtctggaccaaacctgcctgctagctgagaaattc
tgcgacgggcatgctgactgcgccgatcactcggatgaaaactgtgctgatgccaagcaa
cagtcggaaacaaaggtctctactccaagtacacctactcttcacactccatcctcaaag
atgaacccgggcaatgccgtagaggaaaaccatgaggtcctggaggcggcggagtgcaga
cagaatcgttgcagtgggaaagggcactgtgtgaaaattgatggggtcactacatgcaaa
tgttcaaagggctacagtggggtgtcttgtcaagacattgcaccaaaaggcatgaagggc
cccatcatctatggtgccgcaggtctctgtggcgtagttctcattgctgtgatggcagtg
gtcctcaaaaagaatgtctcaagaggagggagaccggatgcaacagtggaaaccagcatg
tctgaactggagaaaaaagtggaaaccacaactggtgcacagaatgcccaggcaacttca
gagaagaaagagggaccagtatcttctgtggattaa
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