Xiphophorus couchianus (Monterrey platyfish): 114154082
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Entry
114154082 CDS
T05908
Symbol
pold2
Name
(RefSeq) DNA polymerase delta subunit 2
KO
K02328
DNA polymerase delta subunit 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
xco03410
Base excision repair
xco03420
Nucleotide excision repair
xco03430
Mismatch repair
xco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114154082 (pold2)
03410 Base excision repair
114154082 (pold2)
03420 Nucleotide excision repair
114154082 (pold2)
03430 Mismatch repair
114154082 (pold2)
03440 Homologous recombination
114154082 (pold2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114154082 (pold2)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114154082 (pold2)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
114154082 (pold2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
114154082 (pold2)
MMR (mismatch excision repair)
DNA polymerase delta complex
114154082 (pold2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
114154082
NCBI-ProteinID:
XP_027888660
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All DBs
Position
12:complement(23562845..23568242)
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AA seq
522 aa
AA seq
DB search
MLISRDSHVKAQFRGNCSLFLFAWRKIGKYIKIPHLRRKSQTQTYVSTRTVMFSDLSAQR
EGSSLLCRPASEDQGPVFERTSLDYSPRTERYRVGERSFNRQYAHIYAARLMEMRPLLSE
RAKHKWGPDVHIRKLCDLETGEQCCIVGTLFKRMDLQPSILKEISEEHNLLPQPARNKYI
TEADELILEDELQRIKLEGKIDRDKCVTGSVIAIFGAEKNDGKFTVEDFCMADLPSQTPR
PTLSCDKFVLLASGLGLGSSKADSMLGLQLLVDMVTGQLGDAGEQSGAATISRVLLAGNL
LSQSTQDKDASTKAKYLTKKTQAGSVEAIRLLDELLLQLVASVPVDVMPGQYDPTNYTLP
QQPLHRCMFPLSSVYPTLQLVSNPYEANIDGVRFLGTSGQNVCDIKKYSSMDSHLEILEE
TLRLRHLAPTAPDTLGCYPFYQRDPFMLEECPHVYFSGNAPVFESKLIRGSDGQEVLLVT
VPDFSSTQTACLVNLRTLRCEPAFFSAFSADEDEESEMNISH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttaatctcgcgagacagtcacgtgaaagcgcaatttcgcgggaattgttctctgttt
ttgtttgcctggagaaaaatcggaaaatacatcaaaataccacatttaagacggaaaagc
caaacccagacctacgtttctaccaggaccgtcatgttctccgacctgagtgctcagagg
gagggctcctctctgctctgccgcccagcctcggaggaccagggcccggtgtttgagagg
acctcgctggactacagcccccgcaccgagcgctaccgagtcggggagcggagcttcaat
aggcagtatgctcacatctatgcggcacgactcatggagatgagacccctgctgtcggag
agagccaaacacaagtggggtccagatgtgcacatcaggaagctgtgtgacctggaaaca
ggggagcagtgttgcattgtaggaaccctgttcaagcgtatggacctgcagccatctatt
ctgaaggagatcagtgaggagcacaacctcctgccccagcctgcacgaaacaaatacatc
actgaagcggatgaactgattctggaggatgagctgcagaggattaaactagagggcaaa
attgacagagacaagtgtgtcacaggtagcgttatcgccatctttggagccgagaagaac
gacggcaagttcactgtcgaggacttctgcatggctgacctcccttcgcagacgcccaga
cctacactaagctgtgacaagttcgtgctcctggcctcagggctcggcctaggcagcagc
aaggccgacagcatgctgggtctgcagctgctggtcgacatggtaaccggtcagctcggt
gacgcgggggagcagagcggggcggcgaccatttccagggtcctgctggccgggaacctg
ctgagccaaagcacccaggacaaagatgcatctacaaaggccaagtatcttactaagaag
actcaggccggcagtgtggaagccatccgcctgcttgatgagctgctgcttcagctggtg
gcctccgttccagtggacgtgatgccagggcagtacgaccccaccaactacaccctccca
cagcaacccctccacagatgcatgttccctttgtcctccgtgtaccccaccctgcagctg
gtctccaatccatacgaagccaatatcgatggagtcaggtttttaggcacatcaggtcag
aacgtgtgtgacatcaagaagtacagcagcatggacagccacctggagatattagaggag
acactgcggctccggcacctggcccccacggcccctgatacgctaggttgctacccattt
tatcaaagagacccgtttatgttggaggaatgtccccatgtgtacttcagtggcaacgct
ccagtgttcgagtccaagctcatccgaggttctgatggacaggaagtccttctggtgacc
gtgccagacttcagcagcacccagaccgcctgcctggtcaacctgcgcaccctgcggtgc
gagccggctttcttctcagccttctctgccgacgaagatgaagaaagtgagatgaacatc
agtcattag
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