Xiphophorus couchianus (Monterrey platyfish): 114154129
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Entry
114154129 CDS
T05908
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114154129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114154129
03036 Chromosome and associated proteins [BR:
xco03036
]
114154129
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114154129
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
114154129
Chromatin remodeling factors
BAF complex
114154129
PBAF complex
114154129
GBAF(ncBAF) complex
114154129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
114154129
NCBI-ProteinID:
XP_027888741
LinkDB
All DBs
Position
12:2760022..2800347
Genome browser
AA seq
1607 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QAQGQSDYSQDNMYPMHKPMEAAMNDKTMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQH
SQGYMSPHPSPLGIHEHASSPMSGGGGGPTPPHMPPAQPSPMMSMDPQGGMASMSGMSQP
GRGPSSFSPIQLQQLRAQILAYKILARGQPLPENLQLAVQGKRSLPTMQQQQPQAPLPPQ
QQQPQQPQQQQQPQPQQQQQQQQASGASPYRPSGMSMAPMSGPQSSPCPTPALQGHNQST
GPKPWTDGQASDNQAQKHLTPVPSGRPSPAPPQAPVGAPGPVPGSSGAVHPPGQQVSPML
QMQQKQNRITPVQKPQGLDPVGILQEREFRLQARIAHRIQELESLPGSLPPDLRTKATVE
LKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLE
QEKKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTRAVANWHTNTEREQKKETERLE
KERMKKLLEEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRR
KTKKKKVEGDGEGTSAIGPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAW
LEMNPGYEVAPRSDSEESGSEFEEEDEEEMGKAETEEKKKVDPNGDKVAENDTKNIIESA
KQDVDDEYSVPTGQTSSQSYYGVAHAVIERVEKQSSLLINGMLKQYQVQGLEWMVSLYNN
DLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVK
IAYKGTPGLRRGLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC
KLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG
ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQRVLYRHM
QKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIING
HELYRASGKFELLDRILPKLHATGHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKS
EDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHR
IGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILE
HEEQNEDEDEVPDDETLNQMIARNEDEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPS
WIIKDDAEVERLTYEEEEEKMFGRGSRCRRDVDYSDALTEKQWLRAIEDGNLEEIEEEIR
LKKRKRKRRQDKDSSSRDDGGMKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDG
SGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVRNHKYRSLGDLEKDVMLLCQNA
QTFNLEGSQIYEDSIVLQSVFKSARHKIAKDEDSEDDSDEDDDDDYDSEAEAKSVRVKIK
LGRDGRSHDKGKKRQSRGKAKPVVSDDDSDDDQDDNDLSDKSKSDDD
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccgtcagacacgtcaggtggcatgtcccatcctggcccgtcaccaggggca
ggcctgtccccagggcccatcttgggccccagccccggacccgacccctcaccaggttct
gttcacagcatgatgggccccagtcctggaccagggacacccaacgcaccgcacggcatg
caggcccagggacaaagcgattactctcaggacaacatgtatcctatgcataagcccatg
gaggcggccatgaatgataagacgatggccgaggcgatgcatttcggtcacatgaaaggt
gtcggcatgcgatccctgcacagtggcatggggcctcctcagagcccgatggaccaacac
agccaaggatacatgtctccacatccatccccactgggaatccatgagcatgcctccagc
cccatgtctggaggtggaggagggccgaccccgccccacatgcctccagcccagcccagc
cccatgatgtccatggaccctcagggaggcatggccagcatgtcagggatgagccagccg
gggcgcggcccctcttccttcagccccatccagctgcagcagctcagggcgcagatcctg
gcctataagatcctggcccgcgggcagccgctgcccgagaacctccagctggctgttcag
ggcaaaaggagcctacccacgatgcaacagcagcaaccgcaggcaccgctgccgccgcag
cagcagcagccacaacaaccacagcagcagcagcagccgcagccgcagcagcagcagcag
cagcagcaagcatctggtgctagcccatacaggccttcaggtatgtcgatggctcccatg
agcggcccccaatcaagcccctgcccaacaccagcactgcaaggacacaatcaaagcacc
ggacccaagccttggactgacggtcaagctagtgacaatcaagcacagaagcacctcacc
ccggtccccagtggacgcccgtctcccgctcccccccaggcgcctgtaggggccccaggc
cccgtcccggggagttcaggggccgttcaccctccagggcagcaggtgtcccccatgctc
caaatgcagcagaaacagaaccggatcacaccggtccagaagccccaggggttggacccg
gtgggaatcctgcaggagagagagttcagactgcaggcccggatcgctcatcggatccag
gaactggagagtctgcctggctctttgcctccggacctccgaactaaagcgacggtggag
ctcaaggcgctgcggctgctcaacttccagcggcagctgaggcaggatgtggtggcatgt
atgaggcgcgacacgaccctggagacggccctcaactcgaaggcgtacaggcgcagcaag
cggcagacgctcagggaggcgcgcatgacggagaaactggagaagcagcagaaactggag
caggagaagaagcgccgacagaaacatcaggaatatctcaacagtattctccaacatgcc
aaggactttaaggaataccaccgctcggtgtccgggaaaatccagaaactcacccgagcc
gtagccaactggcacacaaacaccgagcgggagcagaaaaaggagacggagcggctggag
aaggagaggatgaagaagctgctggaagaggatgaggaaggctatcgaaaactcattgac
cagaagaaggacaagcgtctggcctacctgctgcagcagacggatgaatacgtggccaac
ctcacgactctggtgtacgaacacaaagccgctcaggctgccaaggagaagaagagaagg
aagacgaaaaagaagaaggtggaaggagacggtgaaggtaccagcgccattggaccggat
ggcgagcccatggatgagagcagccagatgagcgagctgccagtcaaagtgatccagacc
gagaccgggaaggttctgcaggggaccgatgcccccaagtccagccagctggaggcttgg
ctggagatgaaccctggatatgaagtcgctccccgttcagacagcgaggaaagcggctca
gagttcgaggaagaggatgaagaggaaatgggcaaggcggaaacagaggagaagaagaaa
gttgatcccaacggagacaaagtggctgagaacgacaccaagaacatcatcgagtcggcc
aaacaagacgtggatgatgagtacagcgtccccactgggcagaccagctcccagtcgtac
tacggtgtggcgcacgccgtcatcgagagggtggagaagcagtcgtctctgctgatcaac
ggcatgctcaaacagtaccaggtccagggtctggagtggatggtgtccctctacaacaac
gacctgaacggcatcctggctgatgaaatgggcctggggaagaccatccagaccatcgcc
ctcatcacctacctgatggagcacaagaggctcaacggcccctatctcatcatagttcct
ctctcgactttgtccaactgggtttatgaacttgacaaatgggctccttctgtggtcaaa
attgcttacaagggaactcctggtctgcgtcggggtctcgtccctcagctccgcagcggc
aagtttaacgtcctcataacgacatatgaatacatcatcaaggacaaacacatcctggcg
aagatccgctggaagtacatgatcgtggacgagggccaccgcatgaagaaccaccactgt
aagctgacccaggtgctgaacacccactacgtggctccgcgccgcctgctgctcaccggg
acgccgctgcagaacaagctgcccgagctctgggccctgctcaacttcctgctgcccacc
atctttaaaagctgcagcacctttgagcagtggttcaacgcgccgttcgccatgactgga
gagagggttgaccttaacgaggaagagaccatcctgatcatccgccgtctgcataaggtg
ctgcgcccgtttctgctgcgcaggctgaagaaggaggtggagtctcagctgcccgagaaa
gtggaatacgtcataaaatgcgacatgtctgcgatccagagggttctctaccgccacatg
cagaaaggcatcctgctgaccgacggctcggagaaagacaagaagggcaaaggcggagct
aagactctaatgaacaccatcatgcagctgaagaagatctgcaaccatccgtacatgttc
cagcacatagaggagtcttttgctgagcacttgggctacccgaatggcatcatcaatggg
catgaactgtacagagcttctgggaagtttgagctccttgatcggatcctaccaaagctc
catgccactggacacagggtcctgctgttctgccagatgacgtctctgatgacgatcatg
gaggattacttcggctatcgcaacttccagtatctacgcctcgatggaaccaccaaatcc
gaggaccgagccgcactcctaaagaaatttaacgaggaagggtcccagtacttcatcttc
ctcctcagtaccagagccggtggcctggggctcaacctgcaggccgccgatacggtcgtc
atctttgacagtgactggaacccgcaccaggacctgcaggcccaggatcgggctcaccgc
atcgggcagcaaaacgaggtccgcgttctgcgcctctgcaccgtcaacagcgtggaagag
aagatcctggctgctgccaaatacaaactgaacgtggatcagaaagtcatccaggctggc
atgttcgaccagaaatcctccagccacgagcggcgcgccttcctgcaggccattttagag
catgaggagcagaacgaggatgaagacgaggtccctgatgatgaaacgcttaaccagatg
atagctcgtaatgaagacgaatttgatctgttcatgcgcatggacatggaccgtcggcgc
gaggacgcccggaacccaaagcgtaagcctcgtctgatggaagaagacgagctgccgtcg
tggatcatcaaggacgacgccgaggtggagaggctcacctacgaggaggaggaggagaag
atgtttggccgagggtcgcgctgccggcgggacgtggactacagcgacgcgctgaccgag
aaacagtggctgcgagccattgaggacgggaacttggaggagatagaggaggagatccgc
ttgaagaagcgtaaacgcaaacgacgtcaggacaaagactcgtccagcagagacgatggc
ggcatgaaggccaagaagaggcgagggcgaccgccggccgagaagctctcgcccaacccg
cccaaactcaccaagcagatgaacaccatcatcgacacggtcatcaactacagagatggg
tcaggcaggcagctgagtgaggtgtttgtgcagctgccgtccaggaaggaactgccagaa
tattacgagctgatcagaaaacctgtcgacttcaagaagatcaaggaacgtgtgagaaac
cacaaataccgaagtttgggcgaccttgagaaggacgtgatgcttctctgtcagaacgca
cagaccttcaacctggagggatcccagatatacgaggactccattgttctccagtctgtt
ttcaagagtgccagacataagatcgccaaggacgaagacagcgaggatgacagcgatgag
gatgatgatgacgactatgactcagaggccgaagccaagtctgtgcgagtgaagatcaag
ctgggtcgggacggacgcagccacgacaaaggcaagaagaggcaaagccgcggaaaggcc
aagccggtggtgagcgacgacgacagcgacgacgaccaggacgataacgatctgtcggat
aaaagcaaaagcgacgacgactga
DBGET
integrated database retrieval system
