Xiphophorus couchianus (Monterrey platyfish): 114154140
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Entry
114154140 CDS
T05908
Name
(RefSeq) STAM-binding protein-like A
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114154140
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114154140
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114154140
04121 Ubiquitin system [BR:
xco04121
]
114154140
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114154140
Peptidases and inhibitors [BR:
xco01002
]
Metallo peptidases
Family M67
114154140
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Others
Others
114154140
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
114154140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
114154140
NCBI-ProteinID:
XP_027888768
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All DBs
Position
12:3351218..3362242
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AA seq
434 aa
AA seq
DB search
MADHMDVNLPPEERVRSLTQRGSSVEVNDDVPPRRYFRSGMEMIRMAHIYTEEGNLERAF
VLYNKYITLFIEKLPKHRDYKTANIPEKKDTVKKLKDVAFPQAEVLKQALLKRFEQEYAQ
YLVKKKAEEEALALEQSRQRALDAERERVAVMQRRQREQEQFSAFEEMIRRQELEKERQR
VLLEFATPSAPPADTPLIPGIQGPPLVSPTAPLSPGDFGANDYQHHRPAATPGTPVAGLP
SFDRSLKPGSLVSPGNNSTMVDALRQLAVPAELCRSFLRLAEANTSRAVETCGILCGKLT
RNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQHDLITLGWIHTHPTQTAFLSSVDLH
THCSYQIMLPEAIAIVCSPKFNEIGYFRLTDRGTDEISSCKQKGFHPHSKDPPLFTHAGH
VNITDDSVSMMDLR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcacatggatgtcaacttgccacccgaagagcgagtccgctctctgacccaa
cgaggcagctcggtggaagtcaacgacgacgtgccgccgcgacgttacttccgctctggc
atggagatgatccgaatggcccacatctacacagaagagggaaacctcgaacgcgccttt
gtactttacaataaatatattacgctttttattgaaaaacttcccaaacatcgggattac
aagactgcaaacatcccagagaaaaaggacacagtaaagaaactcaaagatgtggcgttt
cctcaagcagaggttctcaaacaggctcttttaaaaagatttgaacaagaatatgcacag
tatctggtcaaaaagaaagcggaggaggaggccctggcgctggagcagtccaggcagcgt
gcgctggacgccgagcgggaacgcgtcgccgtaatgcaacggcggcagcgggagcaggag
cagttcagtgccttcgaggagatgatccgtcgccaggagctggagaaggagcgccagcga
gtgcttctggagtttgccacgccgtccgcgcctcctgccgacacgcccctcattcctggc
atccagggcccgccgttggtgtcccccaccgccccgctgagccctggcgatttcggcgcc
aacgactatcagcaccatcggcccgctgctacgccgggcacgccagtggccggcctaccc
agctttgaccgctcgctcaaacccgggtctctggtcagccccgggaacaacagtacgatg
gtggatgccctgcggcagctggccgttcctgctgagctgtgccgcagcttcctgaggctg
gccgaggccaacaccagccgcgctgtggaaacctgcggcatcctgtgtggaaaactgacc
agaaatgcgttcactgtgactcacgtcatcgtgccgaagcagtgcggcgggccggactac
tgtgacactgagaacgaggaggagctgttcctgatccaggaccagcacgacctcatcacc
ctgggatggatccatactcaccctacgcagaccgccttcctgtccagcgtcgacctccac
acacactgctcctaccagatcatgctgcccgaggccatcgccatcgtctgctcgcctaaa
ttcaacgaaatcggctacttccggctaaccgatcgaggaacggacgagatctcttcgtgt
aaacagaagggcttccatcctcacagcaaagatcctcctctcttcacacacgccggacat
gtgaacatcacggacgactctgtgagcatgatggacctgcggtga
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