Xiphophorus couchianus (Monterrey platyfish): 114154159
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Entry
114154159 CDS
T05908
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114154159
03037 Cilium and associated proteins [BR:
xco03037
]
114154159
Transporters [BR:
xco02000
]
Other transporters
Pores ion channels [TC:
1
]
114154159
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114154159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
114154159
NCBI-ProteinID:
XP_027888785
LinkDB
All DBs
Position
12:23231506..23242127
Genome browser
AA seq
966 aa
AA seq
DB search
MPVDTLITSENDTDIELDFAGDEDFQENHERQKHKGKRRNGDRPKNKRENQRRKRSSKSV
QGIREESQSTTERRERRRRQRGKAEHETSGHQGNKGERDQTRVKTTKSKKNLKNEKTRKL
EGKEDGEAQERSEKGKLKPVCAKNEEKIESGDQLKEKEKALGVKKKKKRKKVVETSSEPE
TSEESEDEEEVNNDGEVRPELLSPEELEKLKEAVDEKKKLIQSLRGKPWPMKQKLVTLRE
SQLFVEKYEGALGKGKGRKLYAYKVMMTKKWKKFQRDFENFKTACIPWEMKIKEIESHFG
SSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEAGAMDFAV
LWDFGGYAQYSVLFYGYYNNQRAIGWFKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANE
SGVGDDNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTR
FLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPM
LFDVISALENYHPRVALQWQLGRIFALFLGNLYTFIIALMDAINLKRKEEKVVKYNITMW
EASLYNGTGSENSTAPPVTIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFL
RAVLVRFLNHCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNLLRL
HVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCG
PFSGKNRMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYRE
ANVELKNKLQMQNEENKKKNKQAALKAQMDLEEARKSACQTAELQRNNNASVQRREDDEE
IYNKNQRMYHVRNPSPSVGDREPHFPVRGPAPRNCHNGNHGNPRYLPGFHQQSEPRMYRV
PSLERH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtagacaccctgatcacctcagagaacgacactgatattgaattggattttgca
ggtgatgaagattttcaagaaaatcatgagaggcaaaaacacaaagggaagagaagaaat
ggtgacagaccaaaaaacaagagggaaaatcagagaagaaaaagatcatccaagtcagtg
caaggaataagagaggaatctcaatccacgacagagagaagagagagacgtaggaggcaa
agaggaaaagctgaacatgaaacaagcggacatcagggaaacaaaggtgagcgggatcaa
accagggtcaagacaacaaaatcaaagaagaacctcaaaaatgagaaaaccagaaagctg
gaggggaaggaggatggagaagctcaggaaagaagtgaaaagggaaaactgaaacctgtg
tgtgccaaaaatgaggagaaaatagaaagtggagatcaacttaaggaaaaagaaaaagca
cttggagtgaagaagaagaaaaagcgcaaaaaagttgttgaaacgagttcagagccagag
acgagtgaggaaagtgaggatgaggaagaagtcaataatgatggagaggtgaggcctgag
ttactgtcaccggaggagttggagaagttgaaggaggcagtggatgagaagaagaagctg
atccaaagtctgagggggaagccctggccaatgaaacagaaacttgtcactttacgagag
tctcagctatttgtggagaaatatgagggagctttggggaaagggaaaggcaggaagctc
tacgcatacaaggtcatgatgacaaagaagtggaagaagtttcaaagagactttgagaac
ttcaaaacagcctgcatcccgtgggagatgaaaattaaagagattgaaagtcattttggc
tcctcagttgcctcatacttcatcttcttacggtggatgtatggcatcaacatgatcctg
tttggtttgaccttcggcctggttatggtaccagaggcattaatggggaggccctatggc
agcatcccgagaaagactgtccccagagctgaggaagctggtgccatggactttgctgtc
ctttgggactttgggggttacgctcagtattcggtcctcttctatggttactataacaac
cagcgcgctattggctggttcaagtttcgtatgccgttgtcgtacttcctagtcggtgtg
ggcacagtggcctacagctatatggttgtcatacggacgatggcgcgtaatgcaaacgag
tcaggggtcggagatgacaacagcttcaatttcagctggaaaatgttcacaagctgggat
tacctgataggaaaccctgagacagcagataacaagtttgcctccatcaccaccagtttt
aaggaagcaatcttggaggagcaagagagccgaaaggacgacaacatccatctgactcgt
ttcctgcgcgtgctggccaatttcctggtgttgtgctgcttggcaggaagtggatacctc
atttactttgtggtgcgtcggtctcagaagtttgccctggatggtctggagaatcacacc
tggtgggaaagaaatgaggtgaatatggtcatgtcgttactgggaatgttctgccccatg
ctgtttgacgtcatcagcgctctggagaactaccacccccgtgtcgccctgcagtggcag
ctgggtcgcatctttgcccttttcctagggaacctctacaccttcatcatcgcactgatg
gacgcgatcaaccttaaaaggaaagaggagaaagtagtaaagtataacattacaatgtgg
gaagcaagtctttataacggcacaggatcagaaaacagcactgctccacccgtcaccatc
caccctgctgatgtgccgagagggccctgctgggagacgatggtggggcaggagtttgtt
cgcctgattatatctgacacaatgacgacttacattacgctgctgattggagatttccta
agagctgtgcttgttcgttttctgaaccattgctggtgttgggacctggaggctggattt
ccttcgtactctgagtttgatgtcagtggaaatgtcctggggcttatcttcaaccaagga
atgatatggatgggtgccttctatgccccttgcctgccggctctgaacctcctgcgactc
catgtgtccatgtacctgcagtgctgggctgtgatgtgctgcaatgttccacaggaacgg
gtctttaaagcctcgggctccaacaacttctacatggccatgttgctggtcatcctcttc
ctatccactctaccggccatttacaccattgtaaccatccccccatcatttgactgtgga
cctttcagtggcaagaacaggatgtttgatgtgatccaagagacgctggagtccgatttc
ccggcctggtttagtaaagtgttcagctatgcatctaaccctgggctggtgctgcccttt
atattgctcatggtactggccatttattacttacagtccacatccaaaagctacagagaa
gcaaacgtggaactgaagaataaactacagatgcaaaatgaagaaaacaagaaaaagaat
aaacaagctgcactgaaagctcagatggatctggaggaggccagaaaatcagcatgtcag
actgcggagcttcagaggaacaacaatgcttcagttcaaagacgagaggatgatgaagaa
atctacaacaaaaatcagaggatgtatcatgtgcgcaacccttctccgtctgttggtgac
agagaaccacacttcccagtgagaggccctgctcccagaaattgccataatggcaaccat
gggaacccaagataccttcctggtttccatcagcaaagtgagcccaggatgtacagggtg
ccgagtctggagagacactga
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