Xiphophorus couchianus (Monterrey platyfish): 114154169
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Entry
114154169 CDS
T05908
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
xco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114154169
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114154169
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114154169
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114154169
03036 Chromosome and associated proteins [BR:
xco03036
]
114154169
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114154169
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114154169
SWI/SNF complex
114154169
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114154169
PBAF complex
114154169
SWI/SNF complex
114154169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
114154169
NCBI-ProteinID:
XP_027888805
LinkDB
All DBs
Position
12:5002201..5011582
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLATVEERKKI
VESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPTYLREQKAKRNNQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQPEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
LLEDQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGEADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagcaaaacgtttgggcaaaaaccggtgaaatttcagctcgaagaggatgga
gaattttacatgatcggttctgaggtggggaactacctgcgcatgttcagaggctcccta
tataagcgatacccgtcattatggagaaaactggcaacagtggaagaacggaagaaaatt
gtagagtcttcacacgatcacggctacactcagctggccaccagcgttacgctcctgaag
gcctcggaggttgaggagatcctcgaagggaacgatgaaaaatacaaagctgtgtctatc
agcactgagccgcccacctacctcagggaacagaaggcaaagaggaacaaccagtgggtt
cccacgctgcccaacagttcccaccacctggacgccgttccctgctccaccaccatcaac
cgcagccggctgggccgggacaagaagaggaccttccccctgtgcttcgacgaccacgac
ccggcagtgatccatgaaaacgccacacagcctgaggttcttgttccgatccgtcttgac
atggagatcgagggtcagaaactgagagacgctttcacctggaacatgaacgaaaagctc
atgacacctgagatgtttgcggagatcttgtgcgacgacctggatctgaaccccctggcc
ttcgtccccgccatcgcctcagccatccggcagcagatcgagtcctacccgacagacagc
ctcctggaggaccagacggaccaaagggtgatcatcaagctgaacatccacgtggggaac
atttctctggtggaccagtttgagtgggacatgtcggagagagaaaactctccggagaag
tttgccctgaagctctgctcggagctcggcctgggcggagagttcgtcaccaccatcgcc
tacagcatccgaggtcagctgagctggcaccagaggacatacgccttcagtgagaacccg
cttcctacggtggagatcgccatcagaaacacgggcgaggcagaccagtggtgccccctg
ctggagaccctgacagacgcagagatggagaagaagatcagagaccaggacagaaacacg
agacgaatgaggcgtctggcgaacacgtggtag
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integrated database retrieval system
