Xiphophorus couchianus (Monterrey platyfish): 114154343
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Entry
114154343 CDS
T05908
Symbol
rnf10
Name
(RefSeq) RING finger protein 10
KO
K26979
E3 ubiquitin-protein ligase RNF10 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114154343 (rnf10)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114154343 (rnf10)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114154343 (rnf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
TRAF3_RING
zf-RING_6
zf-ANAPC11
bMG3
Motif
Other DBs
NCBI-GeneID:
114154343
NCBI-ProteinID:
XP_027889164
LinkDB
All DBs
Position
12:26209734..26218841
Genome browser
AA seq
783 aa
AA seq
DB search
MLESSAALCQKLGPNSAHCTETNMEKNPSSSTSNKVPPRSSSTGPPPGDSKPKAEGKNNG
GSKRYNRKREPSFPKAENFPGPRRTNSQKSKNFDKRPPQRGGGRQYGVTGGGRREEVAET
RRAEFSPAQFAGPKKISLNHLLNFTFEPRGGNDGVGDGGHSYWGRRNKWGHKNKPFNKEL
FLQANCQFVVTDDQDYKAHFTDPDTLVNWDCVQQVRIYSHEMPSCPICLYPPVAARITRC
GHIFCWPCMLHYLSLSDKSWSKCPICYEAVHTADLKSVVAMETKQYVVGDEITMRLMRRE
KGALVAMPSSQWVKVEEPVRFGDASLSQYSKLLLTSPSQVLNLVTEEKGILQAQLSLEEE
PEGCFIQSALCLLQEQEETLLKHQVANAETPDLSSLILNDPPSPLEEVVTTTISAKPVLQ
YSSAFDEEVAEFPEDTAAELPGCPDAIQESVLEEPPEAEPEPQLEEESPANQAESARPSA
AVVHGPYYYFYQADDCQQMFLHPINVRCLLREYGSLEACPDSITATVVEIVGHTVNEEIR
RRHRYLAHLPLTCEFSICELALQPPILSKETLDTFADDLEKRRRLRQKKARDEKRREKRI
EMEENKKQGKYPEVHIGLENLHHFPAFGSPPHYSSPPIQPDFTLAPPSPLSTSPSSDGIR
FPSLSVSSPTVGSVEDDSHCMSFAQMLKDGKARADAGLRVTPKKDKLLAPPAADSDGESD
GSDRVPVPSFQNSFSQAFEKALLQLDSGPPAPPQPVVEPDEKGGKKKKRKQKLLFSTSMV
HTK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgctagagagctcggcggctctctgccagaagctcggcccgaacagcgctcactgcacg
gagacaaacatggagaaaaaccccagcagcagcaccagcaacaaggttccgccccgttcc
agctccacaggcccgccgcctggagactctaagcccaaagcagaaggtaaaaataatggg
ggctctaagcgctacaaccggaagcgagagccctcctttcccaaagctgaaaatttcccc
ggccctcgccgcaccaattcacagaaaagcaagaatttcgacaagagacctcctcagaga
ggcggaggacgacagtatggagtcacgggcggaggacgacgtgaggaggtagcagagacc
cgccgggccgagtttagcccggctcagtttgctggacccaaaaaaatcagcctgaatcac
ctgctaaatttcaccttcgagcctcgcggaggcaatgacggcgtcggagacggcggccac
tcctactggggccgcaggaacaagtggggccacaagaacaagccctttaacaaggagctt
ttcctccaggccaactgccagtttgtggtgactgatgaccaggactacaaggctcacttc
actgacccagacactctggtcaactgggactgtgtacagcaagtgcgcatctacagccat
gagatgccgtcttgccccatctgcctctatcctcctgtggcggctcgcatcacacggtgc
ggacacatcttctgctggccgtgcatgctccactacttgtctcttagcgacaagagctgg
tccaagtgccccatctgctacgaggccgtgcacaccgctgacctgaagagtgtggttgcc
atggaaaccaagcagtatgtggttggggatgaaatcaccatgcgtctgatgcggagagaa
aagggggctctggtggctatgccaagttcccagtgggtgaaggtggaggagcctgtccgc
tttggagatgcttctttgagccagtattccaagctgctgctgacgtccccgtcgcaggtc
ctgaatttggtaaccgaggagaagggaatcctccaggctcagctcagcctggaggaggaa
cctgagggctgcttcatccagagcgccctctgccttttgcaggaacaagaggaaactctg
ctgaagcatcaagtggctaatgcagaaacccctgacctgtcctcactgattctgaacgat
cctccttcccctctggaggaggtggtgaccactaccatcagcgccaagcctgtgctgcag
tactcctcagcgtttgacgaagaggtggcagagttcccagaggacacagctgcagagctg
ccaggctgtcccgacgccatccaggagagcgtcctggaggagccccccgaggctgagccg
gagccccagctggaggaagagagcccagccaatcaggcggagtccgctcgcccctctgct
gctgtggtgcacggaccgtactactatttctaccaagctgacgactgccagcagatgttc
ctgcatcccatcaacgtgcgctgcctactgcgtgaatacggcagcttggaggcttgtccc
gactccatcaccgccacagtggtggagatagtaggacacacagtcaatgaggagatccgt
cgtcggcatcgctatctggctcacctgccgctcacctgcgaattcagcatctgcgagttg
gccctgcagccgccgatcctgtccaaagaaactctggacacttttgctgatgacttggag
aagagaaggcgcctgaggcagaagaaggcgagggatgaaaaacgcagggagaagcgcatt
gaaatggaggagaacaagaagcaggggaaatatcccgaggtacatatcggactggagaac
cttcatcatttcccagcatttggctcacccccccactacagcagcccaccaatccaaccc
gattttactttagctcctccatcccccctcagcaccagcccttcctctgatgggattaga
ttcccgagtctgagtgtgtcttcgcccactgtgggtagcgtggaggacgattcccactgc
atgtcctttgcacagatgctgaaagatgggaaagccagagctgatgctgggctcagggtc
actccaaagaaagacaagctgcttgcccccccagcggcagacagcgacggtgagagcgac
ggctcggatcgcgttcccgtgcccagcttccagaattccttcagtcaggctttcgagaag
gcccttctgcagctggacagcggtccccctgccccgccacagcctgtggtagaaccagat
gaaaagggagggaagaagaaaaagaggaaacagaaacttctcttcagcacatccatggtt
cacacaaagtag
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