Xiphophorus couchianus (Monterrey platyfish): 114154457
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Entry
114154457 CDS
T05908
Symbol
trpv4
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114154457 (trpv4)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114154457 (trpv4)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
114154457
NCBI-ProteinID:
XP_027889357
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Position
12:17274774..17290344
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AA seq
859 aa
AA seq
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MNEGRSALLRRCHLTRAAPSEDAGDGGTTQAENDAAFPLSALSNLFESEDGSQSAQDTSL
DTTLEQAQPGVQPSQPSDGRQNLRMKFHGAFKKGISNPMDLLETTIYESNVVPGPKKAPM
DSLFDYGTYGNASNQKKRKKKLPRGKTEISCDESQSTDQPKVLKIFTRFILFDCVSRGDP
EGLQGLLEYLQSQEKRLTDEEFRELSTGKTCLPKALLNLYGGRNETIPVLVDIAEKTGNL
REFINTPFRDVYYRGQTALHIAIERRCKQYVELLMEKGADVHAQARGRFFQPKDEGGYFY
FGELPLSLAACTNQPDIVHYLTENPHKKADMRRQDSRGNTVLHALVHIADNTKDNTRFLT
KMYDLLLIKCAKLFPDCNLETVLNNDSMSPLMMAAKLGKIGVFQHIIRREVKDEEVRHLS
RKFKDWAYGPVYSSLYDLSSLDTCGEEPSVLEILVYNSSENRHEMLAVEPINELLRAKWQ
KFAAASFYISVVSYLISMIIFTLVAYSHPTLEEPPPYPYKTSSDYLRLAGEIVTLASAIF
FFLTNVKNVLLKKCPEVKSLVFDGSFQLLYFIYAVLIIVTAALYLSGVKAYVTVMVFALV
LGWMNTLYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYVLFMIGYASALVSLLPVCPTES
AKNSTTYCRNPDTFSTFLLDLFELTIGMGDLDMIHSALYPGVFLILLVSYIILTFVLLLN
MLIALMGETVGQVSKESKKIWKLQWATTVLDIERAFPVCIRKSFRAGEMVTVGKNLDGSP
DRRWCFRVDEVNWCHWNQNLAIISEDPGKTDTSQTNGVQPGVRGLRRDRWSTVVPRVVEL
SRGPRSHDLVVEMEPLTPR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagggccgctctgctctgctcagaaggtgccacctcaccagagctgctccttct
gaggacgctggagatggtgggactactcaggcggaaaatgatgcagccttcccactgtct
gcactctcaaacctgtttgagagtgaggatggctcccagtcagcacaggacacaagtctg
gatacgactctggagcaggctcagcccggcgtccagcccagccagccctcagacggcaga
cagaacctcagaatgaagtttcatggtgcattcaagaagggcatttcaaatccaatggac
ctgctggaaaccaccatatatgaatcaaatgtggtgccaggacctaaaaaagcccccatg
gactccctctttgactatggcacctatggaaatgcaagcaatcagaagaaacgcaagaag
aaactcccaagaggtaaaacggagatatcttgtgatgagagtcaaagcactgaccaacca
aaagttctgaaaatattcactcgcttcatactgttcgattgtgtgtctcgtggagatcca
gagggcctccagggtctgctggaatacctgcaaagtcaggagaagaggctcacagatgag
gagttcagagagctatccacaggaaagacatgtcttcccaaagccctgctcaacctttac
ggtggtcggaacgaaaccattccagtgctggtggatattgcagagaagacgggaaacctc
agagagtttataaacactcccttcagggacgtctactacagaggccagacggcgctccac
atcgccatcgagcgacgctgcaagcagtatgtggagctgctgatggagaagggagcagat
gtccatgctcaagccaggggacgcttcttccagcccaaagatgagggcggctacttctac
tttggtgagcttcccctctctctggctgcctgcaccaaccagcctgacatagtgcactac
ttgacagaaaatccacacaagaaggccgacatgcggcgccaggattcacgtggaaacacc
gtgctgcacgcgctcgtgcacatcgcagacaacaccaaggacaacactcgtttcctcaca
aagatgtatgacctgctgctgattaagtgtgccaagctcttcccagactgcaacctggag
acagtactcaacaacgacagcatgtcacccctcatgatggctgccaaacttggcaaaatt
ggggttttccaacacatcattcgacgtgaggtcaaagatgaagaagttcgtcatctgtca
cgtaaatttaaggactgggcttacggtccggtgtactcctccctctacgacctgtcctca
ttggatacatgtggagaggaaccatctgtgcttgagattctagtatataacagcagtgag
aaccgccatgagatgctggctgtggagcccattaacgagctgctgagggccaagtggcag
aagtttgctgctgcctctttttacatcagcgtggtgtcctacctcatctccatgatcatc
ttcaccttggtggcatattcccacccaacactggaggagccgcctccttacccctacaag
acctcatctgactatttacggctggctggagagattgtaacactggcatcggccatcttc
tttttcctcacaaatgttaagaatgtccttctgaaaaaatgtcctgaggtgaaatcttta
gtttttgatggatcctttcagctgctgtacttcatctatgctgtcctgattatcgtcact
gctgctctctacctgtctggcgttaaagcttacgtcactgtgatggtgtttgcactcgtc
ctggggtggatgaacacactatactttaccagaggcctgaagctcactggcacctacagc
atcatgattcagaagattcttttcaaagatctgttcagattcctgcttgtctatgtgctc
ttcatgatcggttatgcttcagccctggtgtctctgttgccagtttgtcccacggagtca
gctaagaactctaccacctactgcaggaacccagacactttcagcactttccttctggac
ctgtttgaactgactattgggatgggagatttggacatgatccacagtgcactatatcct
ggagtttttctcatcctcttagtctcctatattatcctcacctttgtgctgctactcaac
atgttgattgccttgatgggggagacggtgggacaggtatccaaagagagcaagaagatc
tggaaacttcagtgggcaacgactgtcttggacattgagcgcgcgttcccagtgtgtatt
cgcaagtctttccgagccggggagatggtgactgtggggaagaacctagatggttcacca
gatcgacggtggtgtttcagggtggatgaagtaaattggtgccactggaatcagaacctt
gcgataatcagtgaggatccaggcaagactgatacgagccaaaccaacggggtgcagcca
ggtgtcagaggcctgaggagagatcgctggtccactgtggtccctcgggtggtggagtta
agtagaggccctcgctctcatgatctggtggtagagatggagccactgacgccaagatag
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