Xiphophorus couchianus (Monterrey platyfish): 114154488
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Entry
114154488 CDS
T05908
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114154488 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114154488 (utp15)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114154488 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
baeRF_family11
DUF7099
Motif
Other DBs
NCBI-GeneID:
114154488
NCBI-ProteinID:
XP_027889406
UniProt:
A0A3B5KTR0
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Position
12:complement(9335231..9343247)
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AA seq
528 aa
AA seq
DB search
MASFKPTKIPVYPKLGEKVTQDTLYWKNYKAPVQIKEFGAVSNIDFSPVAPHNFAVTAFT
RVHLYGPFSQEPVKTFTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCRLWDIPNAAELSTYQEHTDYIRCGVTSKLNRDLF
ITGSYDHTLKVFDARAEKSAITMDHGQPVESLLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLALGNNGERLLSASLDRHVKVYNTTTYKVVHNFDYAAAILSLALAPD
DESIVVGMTNSILSIKHRKHTEESKEIMSQQRRRPSYRVFVKGKNYVPKPDDYLVSKPVK
EHLAKYDRELKKFNVSKALDAALEVWLRRKKPEITVGVIKELDRRGTLKNALAGRDEKQL
SQLLHFVIGNIVDTRFAPVLLTAAEMILDIYKSVIGQSALIDQQLLRLQNILESEINLER
ELLEVLGMLDTMFATSITRKEVPYSDVGRSNGLAQGEASSSRPELQVT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacccacaaaaatcccagtgtatccaaagctcggagaaaaagtcaca
caggacactctttactggaaaaactacaaggctcctgtccagataaaagaatttggagca
gtctcaaacatcgacttctctcctgtggctcctcataattttgctgtgactgccttcaca
agagtccacctctatgggcccttctctcaagagcctgtcaaaacatttacccgattcaag
gacactgcgtattgtggaagattcaggtcagatggccagctgcttgtggcgggatgcgaa
gactcggttgtcagactttttgatgtcagcggcaaggtggcactaaggatgttcaaaggg
cacacaaaagccgtacatgtcactgacttcacctcagaccgttatcagatcctcacggga
tctgacgactacacctgccgactgtgggacatcccaaacgcagccgagctcagcacctac
caggaacacacagactacattcgctgtggtgttaccagcaaactcaacagagatctcttc
attactggatcatatgaccacactctgaaagtgtttgatgccagagcggagaagagtgcg
attaccatggatcatggacagccggtggagagtctcctcctctacccctctgagggactc
ctcgtctcagcaggtgggcgctacgtcaaagtgtgggatctcctaaaaggaggtcaacct
ctggtgtcgctgaaaaaccatcataaaaccgtcacctgtttggctctcggcaacaacgga
gagagactgctgtcggcatctctggacaggcatgtgaaagtctacaacacaaccacgtac
aaagtggtccacaactttgactatgctgctgcaatcctcagtttggctttggctccggat
gacgagtccattgttgtgggaatgaccaacagtattttaagcatcaaacacagaaaacac
actgaagagtcaaaggaaataatgagccaacagagacgccgcccttcatatcgtgtcttt
gtgaaaggaaaaaattatgtcccaaaaccagacgactatcttgtcagtaagccagtcaaa
gaacatttggccaaatatgacagggagctcaagaaatttaatgtatccaaagctttggat
gcagccttggaggtgtggttaagaaggaaaaagccagagataactgtgggtgtaatcaag
gagctggaccgaagaggaactctaaagaatgcgctagcaggaagagatgaaaagcaactc
tctcagttactccactttgtcattggaaacattgtcgacaccaggtttgcccccgtcctt
ttgacggcagctgaaatgatccttgatatctataaatcggtgattggccagtcggcactg
atcgaccagcagctgctgcgcctacagaacatcctggagtcagagatcaacttggagcgg
gagctactggaggtcctgggaatgttggacaccatgtttgccacctccatcactcgtaag
gaggtgccgtactccgacgtgggaagatctaatgggctggctcagggagaggcgagcagt
tcgagacccgagcttcaggtcacctga
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