Xiphophorus couchianus (Monterrey platyfish): 114154491
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Entry
114154491 CDS
T05908
Symbol
scarf2
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114154491 (scarf2)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
114154491 (scarf2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
114154491
NCBI-ProteinID:
XP_027889408
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Position
12:complement(6218316..6241375)
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AA seq
944 aa
AA seq
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MEVKNCFTTAALLCLFFCSVFSQELNVKGRNVCKASGSSRLVCCSGWGQLGDECLTPVCE
GNFTCKENEVCVRPNECRCRHGYFGASCDTKCPAQFWGPDCKGRCNCYPNGQCDDLTGKC
TCNHNRWGPNCENACQCQKGNCDQDTGKCTCHTGWWGPHCHNMCYCSINSVCDVNTGRCL
CHPGWTGRNCANQCNCNGSPCEQYTTRCQCKDRMWGPRCDRVCQCIHGKCNKADGSCTCT
PGYRGKFCREPCPAGFYGQNCRNRCGHCKGQQPCKVTEGRCITCDRGWNGTRCDQLCSKG
FFGENCQEVCPTCKDGHHCDPIHGKCSHCNPGWIGDRCEVRCPNGTYGENCENNCSQCFN
GICHVVTGECLCDPGFYGIYCNKTCQPGQYGVNCNQTCSCNDKNCDPVSGACHLQPNQRM
GVIAAGSLVSFLLIALLSLLCCCCLCQDKDDHNKKAKRILCGRFSRISTKLPRIPLRRQK
LPKVVVAHHDPENTFNCSFIEPPSVAEQPSPSSWSSQESFSSFESGDEGPIYCVPHEESM
SDSKGKQSPNPVDENSEDDTFQEDAGEYTSLKDTSVTKPESNELSILKCSDSEISNSGSE
SAAQYACIARLSKQSKEDDCSGKDGDGNLTSEPKGNGKPPPSPGKPKPRPPDPSTKPKVS
WIHGNATGSQQPEQQGGNRAFAVSKEKKRSSSNGSSKNKECHKIKEKSRSQQKKQDGNDT
NANGSPSKHKLLQGKKSGDEHSSPSHMEHINGVVQNALKMISSFRSSSPEKKIVENPKQS
TKEPPKSPKVIHPHMNSEAATLLAAQLKEKTQSINRNEGTGLTKTNGLSKPKNNQEKPTP
PQKAKRTNSSGLSQQGSTKPLLPTTSNLQKMVAPITNNFGTPEAKSPEKQDLNGSRMGDL
LDPTPKKTPIKKPPRKKGKGGTLDTPESKTLQQKTAIMPPQVVK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaagaactgttttactaccgctgcgctgctttgtcttttcttttgctccgtt
ttcagccaagaactcaacgttaaaggcaggaatgtgtgcaaagcatccgggtcatcaaga
ttggtttgctgcagtggatgggggcagctgggagatgaatgcctgacacccgtctgtgaa
ggcaacttcacctgtaaggaaaatgaggtgtgtgtcaggccgaatgaatgtcgctgccga
catggatactttggagccagctgtgacacaaagtgccctgcccagttctggggccctgac
tgcaaaggaagatgcaactgttaccctaatggccagtgtgacgatttgaccggcaagtgc
acctgcaatcacaatcgttggggacccaactgcgagaatgcttgtcagtgccaaaagggc
aactgtgaccaagacacaggaaaatgtacctgtcacactgggtggtggggtccacactgc
cacaacatgtgctactgcagcataaattctgtctgtgacgtgaatacggggcgatgtctg
tgccatcctggctggactgggaggaactgtgcaaaccagtgcaactgtaacggatcgccg
tgcgagcagtacacgacacgttgccagtgcaaagacaggatgtggggtcctcgatgcgat
cgagtgtgccaatgcatccacggcaagtgcaacaaggctgacggctcatgcacctgcact
ccaggataccgtgggaagttttgcagggaaccatgtcctgctggattttatggccaaaac
tgcagaaacaggtgtggacactgcaagggtcagcaaccctgtaaggtgaccgagggccgg
tgcataacctgtgacagaggctggaacgggacacgatgtgatcagctctgctccaagggc
ttctttggggaaaactgtcaggaagtgtgtcccacttgtaaggacggtcaccattgtgac
cccattcatggcaaatgttctcactgtaatcctggctggattggggacaggtgtgaggta
cgctgccccaacggcacatatggcgagaactgtgagaacaactgcagccagtgttttaat
ggcatctgtcatgttgtcaccggagagtgcctttgtgacccaggcttttatggcatctac
tgcaataagacctgccagcctggccagtatggagtcaactgcaaccaaacatgctcctgc
aatgacaagaactgtgaccctgtgtctggtgcctgtcatctccagcccaaccagcggatg
ggtgtgatcgcagctggatccttggtctcctttttactgattgccctactttctctgctg
tgctgctgctgcctctgtcaagacaaagacgaccacaacaaaaaagccaagcggattttg
tgcggacgattcagccgaatcagcactaaacttccccgtattccactgaggcgacagaaa
ctgcccaaagtagtcgtagcacaccacgacccagagaacacctttaactgcagcttcatt
gagccgccctccgtggccgagcagccctccccctcctcatggtcctcccaggagtccttc
tcttcctttgagagcggagatgaagggcccatttattgtgttccgcatgaagaatccatg
agtgacagcaaagggaagcagagccccaaccctgtggacgaaaactcagaggatgacaca
ttccaggaggatgcaggagagtacacttcactaaaagacacgagtgtcaccaaaccggag
agcaacgagctgtctatactcaagtgctctgacagtgagatttcaaatagtgggtctgag
tctgctgcccaatacgcctgcattgcccgcctctccaagcagtcaaaggaggatgattgc
agtggcaaagatggtgatggtaaccttacatcagaacccaagggcaatgggaaacctccc
ccttcacctggcaagcccaaaccacggccaccagatccatctactaaacccaaagtgtca
tggattcatggaaatgcaacagggtctcagcaaccagagcaacaaggggggaatagggca
tttgcagtgtcaaaggagaaaaagaggagctctagcaatggctcatcaaagaacaaagag
tgtcataaaataaaagaaaagagtcggagccaacagaagaaacaggatggaaatgatact
aatgcaaatggatcacctagcaaacacaaactgctacaaggtaaaaagtctggagatgag
cacagcagtccaagtcacatggagcacatcaacggtgttgtccaaaatgccctaaaaatg
ataagcagtttccgtagctcatcgcctgagaagaagattgttgaaaatccaaagcagagt
actaaagagccaccaaagagcccgaaggtcatccaccctcatatgaattctgaagcggcc
actttactggctgcacagctcaaggagaaaactcagagcatcaacaggaatgaggggact
ggactgacaaagaccaatggactctccaaaccaaaaaataaccaggagaagcccacacct
ccacagaaagccaaaagaaccaactccagtggacttagtcagcagggctccaccaagcct
ctgctgcctaccacaagcaatcttcagaaaatggtggcacctatcaccaacaactttggg
acccccgaagccaagagcccggagaagcaggacttgaacggctccaggatgggggacctt
ctggaccctacaccgaagaagactcccataaaaaagccacctaggaagaaaggcaaaggt
ggtacccttgatacacctgaaagtaaaacactccagcaaaaaacagccattatgccacca
caggtagtgaagtaa
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