Xiphophorus couchianus (Monterrey platyfish): 114154497
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Entry
114154497 CDS
T05908
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114154497 (ttc28)
Cilium and associated proteins [BR:
xco03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
114154497 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
RPN7
TPR_11
TPR_17
DUF6340
TPR_BSK1_C
TPR_14
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
TPR_YpiA_C
HlyE
AP4E_app_platf
BTAD
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
114154497
NCBI-ProteinID:
XP_027889427
LinkDB
All DBs
Position
12:complement(22741666..22978068)
Genome browser
AA seq
2479 aa
AA seq
DB search
MEKQATLKEKFSVFGSRTARRPIRCVAVDDGSRCALSKAEFMEKVRQSNEACQRGDFQEA
VCLYGDALQADPQNCILYSNRSAAFLKLGQHQAALEDAEKACGLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSLGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGAVYQAMGEYETALRCHQSDLEIAEEAGSTTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSDFQ
DGGGGGMVSSSSLEQHIASAREALGVESYYSRGCSSSETESEAGDFLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGFSAKTHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPTAEEEALMVAELLG
CQPLTGSSATKERVMGALTQAECAHFATHISWKLAALVLTPNPECVPGGAGATVGVGTIG
RGASSRRGSSGRGRKGSVGSGYTIPESLNMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKIFVHAFYSA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPVGYSSL
PFSPPCLDNQASDAISVYSLSSVTSSMSFASKSDCDFLSHRQRGGATAHFTVHKHPHVPR
SRSSPQGAAAAGAGTRGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVGGS
TGAGRGYTVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVGKVSSSDTGESDQSSTETDST
VKSQEEKPVHLDPQELAQKILEETHSHLRAVSSLQRVGAEGGTGPAAASARSGTFRSSET
SAFSRPNSSASGRAQSSPKPKPPSRSSSLQKVSSGYNSPAVSESSQKDGSHPSPTMDSHA
QFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADAPDLDR
LRRGVIDEKVQAIHNLKTFWTNAAAQQQQHLGPVKAIHSKSGPIASASRDVLSLLNLSPR
RCSPHDTQDSLELRELGLQSLDSGTKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIRLP
AGNGYKFLSPGRFFPSSKC
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttctgtctttggttctcggacagcgaga
aggcccatccggtgcgttgccgtggacgacgggtcgcggtgtgcactaagcaaggctgag
ttcatggagaaagtgcggcagagtaacgaggcgtgtcagaggggcgacttccaggaggct
gtgtgtctgtacggcgatgctttgcaggccgacccacagaactgcatcctgtacagtaat
cgttcagcagcgttcctcaagctgggtcagcaccaagcagctctggaggatgctgaaaaa
gcctgtggactcaatcccaagtggccaaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgcggacgcactggccgccttcgcctctgggctggcccaggacccc
aagagccttcagctgcttgtggggatggtggaagccgccatgaagtcaccactacgagat
tctctggagcccacctatcagcagcttcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctactgacagcggggcaccacacggcctccgtggtg
gtgctggaagccgctttgaagataggaacgtgcagcctcaagcttcgcggctccgtcttc
tctgccctcagcagcgcccactggtccctgggcaacacagagaagagcctcggatacatg
cagcaagacttggaggtggccaagaccttaggtgaccaaactggggaatgccgtgctcat
gggaatctgggctctgcattcttctccaaggggaactatcgtgaagcattaaccaaccat
cgcaaccagctggtactggccatgaagttaaaggacagagaggctgcttcaatggcgctg
agcagcttgggccatgtatataccgccataggggactatccgaacgccctcgccagtcac
aagcagtgcgtcctgctggccaagcagtccaaggatcagctgtctgaggctcgtgagctg
ggaaacatgggagccgtctacatcgccatgggagactttgataatgctgttcaatgtcat
gagcaacatttgggcattgctaaagccctggaaaataaaagagaagaggcccgagcttac
agcaaccttggtagtgcctaccactaccatcgtaactttgacaaggccatgtcctaccac
acccatgtcctggagcttgcgcaggagctggaggaaaagtccatcgagatgagggcatat
gcagggctgggtcacgctgcccgctgtatgcaagacttggagagagccaagcagtaccat
gaacagcagctgtcaatcgctgaaggactgaaggacagggctgcagaaggaagggcatcc
tccaacttgggcatcattcaccagatgaagggggactacgagactgcactgaaactacac
aaaacacacctggctattgctcaggagctgaatgactatgctgcccaaggcagggcctat
ggcaacatgggtaatgcctacaatgctcttggagctttcgaccaagcagttcgttatcat
cgccaggagctgcagatctccatggaggttaatgaccgtgcctcacaggcctccacccat
ggcaacctggctgtggcgtaccaagccctcggtgcccatgatcgtgctctacagcattac
cagaaccacctcaacatcgctcgagagctgagggatgtccagagcgaagcacgggctctg
ggaaacttgggaaacttccactgctctcgaggagagtttccacaggctgtgccctactat
gagcagtacctcagattgtccccagaacttcaggacatggagagtgaagggaaagtttgt
cacaatctgggttatgctcactactgcctgggcaactaccaggatgctgttaaatactat
gagcaggatcttgcgctggccaaggaccttcatgacaaacttagtcaggccaaggcgtat
tgcaaccttggtttggcttttaaggccctaggagactttactaaggcggaggagtgccag
aagtatttgctgtcactagcacagtccctgaacaatgcacaggctcgctttagagctcta
gggaacttaggagacatctttgtctgtaaaaaggacgtgacaggagccattcagttttac
gagcagcagctggccttagctcatcaggttaaggagcgcagaatggaagcctgtgcttat
gctgccctgggggccacctacagactagtgcagaaatatgacaaagctctaggctaccac
acccaggaactggaggtataccaagagcttggtgacgtctcaggagagtgcaaagcccat
ggccacttggcagctgtctacatggcccttgggaagtacgccatggccttcaagagctac
gaggagcagttggagcttggacggaggttaaaggatcctgttgtggaggctcaggtctat
ggaaacatgggcatcacaaaaatgaatgttggggtgatggaggaggctattggctacctg
gagcagcagttggctaccttgcagcagctgagtggaaacgaagcagtaatggaccggggc
agggcctacggaaaccttggagactgttacgaggccttgggagactttgaggaagcgatc
aagtattatgaccagtacttgtcagtggcacagagcctaaatcgcatgcaggaccaggag
aaagcctacagaggcctaggcaatgggcacagggcaatgggcaatctgcagcagtcgttg
gtttgtttcgaaaaacggctggttgtggcacatgaactcggggagtgcggtggcaaggca
caggcctacggcgagcttggtgcactccacagccagttaggcaactacgagcaggccatt
tcctgcctggagcgtcagctggccatcgctcgcgacacccaggacagactactggagggc
gatgccagctgtggcttgggtgctgtgtaccaagctatgggagagtatgagacagccttg
cgatgccaccagagtgatctggagattgcagaagaagcaggcagcaccacacgtcaggcc
cgggcctacggcaacttgggtcttacctatgagtcacttggaaactatgagcgagcggtg
gtgttccaagaacagcaccttagtgtggcggctcagactaatgatttggctgccaagacg
ttggcctatggcagcttggggagaacacaccatgcgctgcagaactactcacaagctgtc
atgtacctgcaggaaggcctgcggctcgcggagcagctggctcggcgcgaggacgaggca
aagattcgccatcgtctcggcctctccctgtgggccagtgggaacttggaggaggcccaa
catcagctctaccgggcgtctgcactgttcgagaccatccgccatgaggcccagcacagc
acggactataaactctcgctgtttgacctgcaaacctcctgttaccaggctctccaaagg
gtcctcgtcagccttggccaccatgacgaggccttggctgtagcggagcgcggtcgtacg
cgagccttcgctgatctcttggtggagcgacagacgggccaacaggactcggacccctac
acgcctgtaacagtggagcacatcttggacacagtcaacagtcagagagccttggtgctg
tatttctcaatggcagcaggctacctctacagctggctactggctccaggggcagggatc
ctcaagtttcatgaggtttacctcggtgagggcgtgtcagaaggagggtcagacttccag
gatggaggtgggggtgggatggtgagcagctcttcgctggagcagcacattgccagcgct
cgggaggccctgggagtcgagtcgtactacagcagggggtgttctagcagtgagacagag
agcgaggcgggtgattttttggaccaacagtttgaagaactcaacaacaagctcaactcg
gtcaccgacccgacaggcttcctgcgcatggtgtcgagaaacaacctgttcaacaggagc
tgtcagagtatgactagcctcttcagtaacactatgtctcctgccaaagatggtaactcc
tcactgcctcgacgctccagcaaccttggcaaacctccactgcgggcactttacgattta
ctcattgcacctatggagggggggctgatgcattccagcgggcctgttggcagacataga
cagctagtgatggtcctggaaggagagttgtacctcatcccatttgctctgctaaaagga
agctcctctaatgaatacctgtatgagcgtttcagcctcattgctgtgccctccatccat
ggccttggattcagcgcaaagactcactctcggcgtcctggaccagctccctgtggtggt
gtctccatggcagcagtggtgggaaatcctagactaccctcgcctgtgatggaccgctgg
ctttggggacccatgcccaccgctgaggaagaagctctaatggttgcagagctactgggg
tgtcaacctcttactggctcatctgccaccaaggagagggtgatgggtgccctcacgcag
gctgaatgcgcccattttgccacccacatttcctggaaactggcggctctagtgctcacc
ccaaaccctgaatgtgtacctggtggggcaggtgccactgttggggtgggaacaataggc
agaggcgcgagcagtcggagaggcagcagcggtcgaggcaggaagggctccgttggcagc
ggctacaccatcccagagtctctcaacatgcaggatgacagcagtgatgtggagagtatc
tgtgacagtccgcccctgcaggagttcctgctaacagccgcagatattttggacctgagg
ctgcctgtcaagctggtggtgctggggtcgtaccaagaatctagcagtaaggtgacagca
gacggtgttgtgggactaaccagagccttcctggctgctggtgctcagtgtgttcttgtg
tccttgtggcctgtacccgttgcagcctccaagatttttgtccatgctttctactctgcc
ctgctgaacgggaccaaggctagtgcagcactagcagatgccatgaaaaccgtgcagagc
agcaaacagtactctcatccgtccaactgggcaggatatatgctgattggcaatgacgtg
aagcttaacagcccatcttcccttattggccaagcgttggctgaaattttgcagtatcca
gatcgagctcgtgatgctctgagagtcttacttcatctggtggagaagtctcttcagagg
atacaaaatggccaacgtaattcaatgtatacatcccagcagagtgtggagaacaaggtc
gggggcgttcccggctggcaggccctgctgacagccgtgggcttccgtctcgactccgca
ggcactggtattcctgctgcagttttctttcccactgctgacccaggagacagactccag
cagtgtagcactacgctacaatcactactgggtttgccgccgccagctctccaggctttg
tgcaaactcatcactgcttcagaggcaggagagcagctcatcaaccgggctgtcaaaaat
atggtggccatgcttcaccaggtgctagtgcaactccagacaggagagaaggagcaggac
ttctccctcctacccattcaggtgtccattagtgtgcaactgtggagactgcctggatgc
catgaatttctggctgctcttggatttgatttatgtgaggtaggacaggaagaggtggtg
ctaaagacgggcaaactggctaatcggcgcaccttgcactttgctcttcagtctctgctg
gcactgtttgactccacagaactgcccaagcgcctgagcctggacagctcatcctccctt
gagtctttggcttcggctcagtctgtctctaacccattgccagtgggatactcaagcctt
cctttctctcccccatgcctggacaatcaagcatcagatgccatctctgtctacagcctc
agctctgtaacatcctctatgagttttgcctccaagtcagactgtgacttccttagtcat
cgacaacgagggggcgccactgcacacttcactgttcacaaacacccacatgttccacgc
agtcgctcgtccccacaaggagctgctgctgcaggtgcaggaacacgaggtgacgaagag
gagtatgagggcttttccattatcagcagcgagccactgggcagccactgtgactctctg
cctctaccaccaggtcacagtcagcgacaccaccgaggaggcaggggggttggtgggtcc
acaggagcagggagaggctacacggtctctgtgtcatcacggggcagtgtcagcaccccg
acgtctcctgtcaaaacatcccttgtgcccagtccaaactcgccattccagaaggtgggt
aaggtgagcagctcagacacaggcgaatctgaccagtccagtactgagacagacagcact
gtcaagtcgcaggaagaaaaacctgttcatctggaccctcaagagctggcccagaagatt
ctggaggaaactcacagccacttacgagctgtgagcagtcttcagcgggttggagcggag
ggcgggactggacctgctgcggcctcagcccggagcggtacgttccgctcttccgaaacc
agtgcattcagtcgtcctaacagcagcgccagtggtcgagcacagtcttcccccaagccc
aagcctccctcccgttcttcttccctgcagaaggtaagctctggatacaacagccctgca
gtctcagagtcttcccaaaaagatggtagccatccttcccccaccatggacagccatgca
cagttcaaactgaagtacccaagctctccatacagtggccacatttcccgctctcccagc
aatgtgtctcccagctctggacaccagtcaccagctggtagtgctccgtctcctgctttg
tcctactcttctacaggctctgcctgttctacatcagcagatgctccagatctggaccgg
ctaagaagaggggtcattgatgaaaaagtccaagctatccataacctgaagacgttttgg
actaatgccgcagctcaacagcagcaacatctaggtcctgtcaaagccatccacagcaaa
tccggacctattgcttcagccagtagagatgtactgagccttctaaacctctccccacgc
cgctgctcccctcatgacacccaagacagcctggagctgcgggagctgggactgcagtca
ctggatagcggtaccaagaattcttccaatggacaccactgttccaaccccagaaaagtt
gccccgtcgcctacaatttccacaagcagcagccctggtgctcgttctatccgactacct
gccggcaacggatacaaattcctctcgccgggaagatttttcccttcttctaaatgctga
DBGET
integrated database retrieval system
