Xiphophorus couchianus (Monterrey platyfish): 114154510
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Entry
114154510 CDS
T05908
Name
(RefSeq) PDZ domain-containing protein 2-like isoform X1
KO
K24058
PDZ domain-containing protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114154510
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
114154510
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114154510
NCBI-ProteinID:
XP_027889444
LinkDB
All DBs
Position
12:32843230..32980480
Genome browser
AA seq
1958 aa
AA seq
DB search
MPITQDNAFSILLLLEDWHRAQMVRSNNPDNIKEDSLEYKDEEYHNGEEDSFCGSIQLDD
LPLCLAAAQKLVEYITFNFMESDTALSATSSCCSKGLDVEVHAVSFRKSEDDTVEFGLSF
GNIPIFGDPDIRKKGSSRKKREEGPIVNVGCIWVTEVKKKSPAACCRCIKLRDELLSVNG
QLMVGVNVSGASYLVDQCWNGGCIYLILLRRIKRKAPLPPCVKGSFTIPNKMDHCQTQQD
ITDFEVVNCKRTRKFGVISRSSNQGYNESTGSQIQTRNRYSLLNTDAEVSSSLEECSPDL
SPQTQTIHSYNGSAGTLPGRSHSQMLECKMQSFTSEATTQLREGSHIWKMHMVKGHEGLG
IQITGGRGSKRSSHGIIIAHIEKGGAIHRDGRLHVGDELLMVNGQSLVGLTHQEAVSVLR
STTGLVQLVISSQEESKVDFEHFPSTSLPDLISTCRSSSSQFQAAPPSFSYGTFSSTTGL
NNSCLLSPLENPEDFHQGKASETCRCSPTPMKLSCQSQGGSSCLESVGEDDELFVESIIS
GSEVAEKPLSGRRKHSLPHQLDSARVRQEHQIIKKSARSMSTVEEESLWRLAQPSIISSI
VLMKGQGKGLGFSIVGGQDSARGHMGIFVKTIFPHGAAAADGRLKEGDEILEVNGESLQG
LTHQQAIQTFKQLKRGVVTLTIRTRLRSLGLTPCATPTLPSRSSSSNSYTDGGTPVPLGV
EDVEGHKGPGLGPKDCIVMEVTLNKEHGVGLGIGVCYLMLENSVPGIYIHSLALGSIAKI
DGRLSRGDQILEVDSVSLRHAALSEAYAILSECGPGPVSLIISRHPDSKVSEQEMDQIIA
QSTNKDNVFRNRPSSHCQGQSCKSRRADVKSSEEDSPSALSWTMKRFLEPVSRGSLSSET
ELSEYFPHEVPLATSGSVLKSSNSGQGLHQLGSRASTYGPLQSQECSTSVTDVNHSPGCT
TSHNKTSVPLHQHTEPLCHALADSSTISMRSPLLCQRKVIHSEDEFSDDEASDKAENTEP
LTQQQKPTPAHLPQMLSNSIPSGEEIATWLMPRQLFEREDFRGFHTVNLKRKEEETFGLD
LEIMSSPLRVMIAGLKRDSAAEWDCETKLCPGDEIVKIGGKPVNSSSYQEICELMHHLPV
KLSLDVRRATSAVGPSDEVARWNPTQSVQDTPAIATWRNSGESKSSTQTGSEFQPAITKI
IDVSSEGRISLDEYKVPCKIFSDSFTSAAQLEDVSICIQHNVSKNMCTKENIGASVSESV
PDNNRLGSEVAVETTSESLRDKDQALSKLPIDEESSTVACLHFELCQITDPTSAEPSCHV
STKTGHGPAGESPINCTQINTYLKPRSLSQADSGITQVPSGVSGDESQSSNFCGNLSTHT
SSTESKTSDSSGGSHSGGSDFNNQVLKDKADLSPEAMFIFKNTSDLKPLNDSDCSAESGK
VEQQLAAGPPKLNVLSIQSISIAQEEPQLKAFRSESLIPLDRNVALKEFTKFQPTTIVSS
FLNSNRQLDVNICHELSKVSDRMHNAAQHGLSGSTIQTVQCPKEKNIISCSKSSVLSLEQ
SCPSITQRTFMELQLSPASGLISPLFKYNKETTSKPTKDSKIKTYARLASKLSPISRGEI
TNGMTKREGFDYTEKAQLTNTDDPKPSQILVSGETLKFSTSRRICRTMERWSLSKDVTLS
AGYKPFSVRHKIKSYESLANLDKPVAKSSDVHTFAVAYTASLNQRISGYMDSVNSVDWRG
HQRNNSSYNNCLTSVASLSPPLRKSAGNENQKAPDGTISHNRVVLRRKHGRLPTRKVHQS
RTLSMPNLEKLCTDNFNRGNTTAGNKNDRSVCLTPKANMTNCFSPAAMFSSGDDVTSEDT
PQGSPDTRQPGWSIRLKELVEYPVSQRKLKTLLTSQTTQSYVMSLLEETKAHSEVINNNN
TLLVVLNKEEGAGLGFSVAGGADIDQKKITVSAQKLSI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgcctattactcaggacaacgccttcagcattctcctgctgctggaggactggcacagg
gctcagatggtgagatctaacaaccctgacaacataaaagaagacagtttggaatacaag
gatgaagagtaccacaatggagaagaagacagtttttgtggcagtattcagttggatgat
ctgcccttgtgtctggctgcagctcagaaattggtggagtatattacgttcaatttcatg
gagagtgacacagctctgtctgctacaagctcctgttgtagcaagggacttgatgtcgaa
gttcatgctgtttccttcagaaaaagtgaggacgatactgttgaatttggcctgagcttt
gggaacatccctatttttggggatcctgatatcagaaaaaaaggctcttcaaggaaaaag
agagaggagggccccatcgtcaacgtgggctgcatttgggtaacagaggtgaaaaagaaa
agcccagcagcctgttgtaggtgtatcaaactcagagatgaattgctgtcagtaaatgga
caactgatggtgggagttaatgtcagtggagccagctacctggttgatcagtgctggaat
ggcggttgcatttatttgatccttttgcgtcgcatcaagcgaaaggcccctctccctcct
tgtgtcaagggaagtttcactattcctaacaagatggatcactgtcaaacccagcaggac
ataactgattttgaagtggtgaactgcaaacgtacacgcaaatttggggtgatatcacga
tcctctaaccaaggctacaacgaaagtactggatcacagatccaaaccagaaatcggtac
tcccttcttaatactgatgcagaagtcagttcttcactagaagagtgcagtccagacttg
tctcctcagactcaaactattcattcatacaatggatctgctggaactctgccggggaga
agtcacagtcagatgttggaatgcaaaatgcaatccttcactagtgaagctactacccag
ctgagagagggcagtcacatctggaagatgcatatggtgaaaggtcatgagggtcttgga
atacaaataacagggggacgtggctccaagcgctcttctcatggaattattatcgctcat
atagagaaagggggcgctattcacagggatggacgtcttcatgttggtgatgaactactg
atggttaatggtcagtctctagtgggtctcacacatcaagaggctgtttccgtccttcgc
tccactactggtcttgtccaattggtgatatcaagtcaggaggagtcaaaagtggatttt
gaacactttccctccacaagccttccggacctcatcagcacctgcagatcctcttcatcc
cagtttcaggctgcaccccccagcttttcctatgggacattcagtagcaccactggtctt
aacaattcctgcctgttatcaccgctggagaacccagaggacttccatcaggggaaggca
tcagaaacatgccgctgcagtcctacacctatgaagctatcctgccaatcccaaggtggc
agcagttgtctggaatcagtgggcgaggatgatgagctgtttgtggagagcatcatcagc
ggcagtgaagtggcagagaaacctctatctggtcgacgcaaacactccttacctcatcag
ctggatagtgctagagtcagacaggaacatcagataattaagaaatcagcccgctccatg
agcactgttgaagaagagtctctatggcgactggcacagccgtctattatctccagcata
gtgctgatgaaaggccaggggaagggccttggcttcagtattgttggtgggcaggactca
gcacgtggccatatgggcatttttgtcaaaacaatttttcctcacggagctgctgcagct
gacgggcgactgaaagaaggagatgagattttggaggtaaatggagaatcactccaagga
ctcacacaccaacaggccatccagaccttcaagcagctgaaaagaggggttgtgaccctt
acaattcgcacccgtctgcgcagtctcggcctaactccatgtgcaaccccaaccctaccc
agtcgctccagctcatccaactcttacactgatgggggcacacctgtcccattaggcgtg
gaagatgttgaaggccacaagggtcctggtctaggtccaaaagactgcatcgtcatggag
gttactcttaataaagaacatggagttggtctggggattggagtctgttatctgatgctg
gagaactctgttcctggtatctatatccacagcttagctcttgggtccattgccaagatt
gatggaaggctcagtcgtggagatcagattctggaggtggactctgtcagtcttcgtcat
gctgcacttagtgaggcttacgctattctcagtgaatgtggacctggtccagtcagtctc
attataagcagacatccagactccaaggtatcagagcaagaaatggatcaaattattgct
caatcaaccaataaggacaatgtgttcagaaacagaccctcctctcattgccaaggtcag
tcttgtaaaagccgtcgggcagatgtaaagtccagtgaggaggacagcccctctgctctc
agctggaccatgaagaggttccttgagcctgtcagcagaggatccctgagctctgagaca
gaactatctgagtacttccctcatgaggttcctctggccacatctgggtctgttctgaag
agctcaaacagtggtcaagggctccaccagctgggcagcagagcctcaacatatggccca
ctacaatcgcaagaatgcagcacctctgtgacagatgttaaccacagccctggatgcaca
acatcacacaacaagacttctgtccctttacatcaacatacagagcccctttgccatgcc
ctcgctgattccagtaccatctcaatgcggagcccacttctctgccaacgaaaggtcata
cactcagaggatgagttcagtgacgatgaggcatcagataaagctgaaaacactgaacca
ctgacccagcaacaaaaacccacacctgcacacttaccacagatgctatctaactccata
ccaagtggagaagagatagcaacatggctgatgcccagacagctctttgaaagggaagat
ttcagaggttttcacactgttaatttaaagagaaaagaagaagagacatttgggctggac
ctggagattatgtcatcccctctgagagttatgattgctggtttaaagcgtgacagtgct
gctgaatgggactgtgaaactaaactctgccccggtgatgagattgtgaaaattggaggt
aaaccagtgaactcctcaagctaccaggaaatctgtgaacttatgcaccatcttccagtg
aagctgtctttggacgtgaggcgagcaacttcagctgtaggaccaagtgatgaagttgca
agatggaaccctacccagtctgtgcaggacacacctgctatagctacatggagaaactcg
ggagaatccaagagctcaacccaaactggaagtgaatttcaaccagccatcacaaaaata
attgatgtctcatctgaaggcaggatttctttagatgaatacaaagtcccttgtaaaata
ttctctgattcatttacctctgcagcccagctggaggatgtcagcatctgtattcaacat
aatgtttccaaaaatatgtgtacaaaagaaaacataggtgcttcagtgagtgaatctgtc
cctgacaacaatagactgggaagtgaagtggctgttgagactacttcagaatctttgaga
gacaaagatcaggctttgtctaaattaccaatagatgaagagagctctactgtcgcatgt
ctccactttgagctttgtcaaataacagaccccacctctgcagagccatcatgccatgta
tccaccaagacaggacatggaccagctggagagagccccattaactgtacccaaataaac
acttacctcaaaccaagaagcctctcccaggcagactctggcatcactcaggttccttca
ggtgtgtctggagatgaatcacagtcctcaaatttttgtgggaatctgagtacacacact
tcttccactgaatccaagacttcagattccagtggtggatcacattctggaggttctgac
tttaataaccaggtcttgaaagataaagcagatttaagcccagaggctatgttcattttt
aagaacacgtctgatttaaagccacttaatgattcagactgttctgcagaaagtgggaaa
gttgaacaacaactggcagctggacctccaaaattaaacgtgttaagtattcaaagtatc
agtattgcacaggaagaacctcaactgaaagcattcagaagtgaaagcctcatacctttg
gacagaaatgttgccttgaaagagtttaccaaatttcaaccaaccacaatcgtgtccagc
ttcttgaattcaaacaggcagctggatgtgaacatttgccatgaattatccaaagtcagt
gacagaatgcacaatgcagctcagcatggactctctggaagcactattcaaactgtacaa
tgtcccaaagaaaagaacataatttcttgttccaaatcatcagtcttatcactagagcag
tcatgcccctctattacccagagaacattcatggaacttcagttgtctccagccagtggt
cttatatcaccactatttaaatataataaagaaacaacttcaaaacccactaaagactct
aaaatcaaaacatatgcaagattagcatctaaactttctcctatttccaggggtgaaata
actaatggcatgaccaaacgtgaaggctttgattacactgaaaaagctcagctaaccaac
acggatgacccaaaaccaagtcaaattctggtgtcaggcgagaccctgaaattcagtaca
tctcgacgaatctgtcgaaccatggaaaggtggagcttatccaaagatgtcaccctgtct
gcaggttacaagcctttttctgttcgacataaaataaagtcctatgaaagccttgccaac
ttggataaacctgtggctaaaagcagtgatgttcatacttttgcagtagcatatacagcc
tcacttaaccagaggatctctggatatatggactcggttaattctgttgactggcggggc
caccaaagaaataacagctcttacaacaactgtttgacatcagtagcatccctttcccct
cctcttagaaaatctgcagggaatgaaaatcagaaagccccagatgggaccatatcacat
aaccgtgtggtgctgcgaaggaaacatggcagacttcccaccaggaaggtgcatcagtca
aggactctcagtatgcccaatttagaaaaactatgcactgataacttcaatagaggaaat
accacagctggtaataaaaatgatcgcagcgtctgcttaactccaaaagccaacatgacc
aactgtttctcaccagctgcaatgtttagcagtggtgatgatgtgacttctgaggacact
cctcagggatctccagacaccagacagcctggctggtctatcaggttgaaggagctggtg
gaatatcctgtgagtcagcgtaagctgaaaacattgcttacctcccagacaactcagtcg
tatgtgatgagtttgctggaagagaccaaggcccactccgaggtaataaacaacaacaat
actcttctggttgtcctgaataaagaagagggtgcaggacttggcttcagtgttgctggt
ggtgccgacattgatcagaagaaaataactgtaagtgcccagaaattatctatttga
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