Xiphophorus couchianus (Monterrey platyfish): 114154620
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Entry
114154620 CDS
T05908
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114154620 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114154620 (fancc)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
114154620 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
114154620
NCBI-ProteinID:
XP_027889698
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Position
12:complement(12119851..12155859)
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AA seq
588 aa
AA seq
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MTELQVQQTTAHSPNVQQMPFWLEKAIAWGQTDTPHTRNDISLHLKRLRDFLQQLLSEIS
SVSSTTETLNRLPLLGQLLGRLCWNSHVTAEGASRGLLLQCLLALYSEHPSNAVERKANQ
WIQKVLCHLATDEEDGAALGLMKHLGVPTKEYHLKVLKKMVTRIQESIGNRRCSVSSTNK
GCSCGSIWAVSEACVPLITCPEASPLIGALLQQQMTCIRESLSENFLDALHSAYSRCNLL
LDEQAVVSLWYQSLPSLEEAVLNLLESATTAGSTPSKVEEQVSKSLLPKACAQHCSVFLV
VNDIFRTVLKQNERNERVKNVFQTFTKCFFMELSQLQPQTSASLKAFFPQSPPSLLIPLF
TMPSEMPQESLKNHLIWVSSSLQRLTEEEEDEEDSDSSNIRGNHKVFEAWFLLVQCGYWV
QMVVQLLVTSGPEDCGPLLWLLTFYHHPTNRWHHRASQLVQAKAAWDHLYSLFSIVAHLL
PADHLQSFISLLAPKPQQPSLAPSLTLNLLVNFATFGQLPQSISAEITQKVVHQSGLQDE
ATRVLSSLRLRLNDRGSFANDRVQLRIEELHNTIKNKCKPDAPSQTDT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcaggttcagcaaacaacagcacactcgccaaatgttcagcagatgccc
ttctggcttgaaaaagccatcgcttggggccaaactgacactccacacacacggaacgac
atctccctacacttgaagagactgagggatttcctccagcagcttctctcagaaatcagc
agtgtgagctccacaacagaaaccttgaataggctccccttattaggtcagcttttaggc
cggctgtgctggaactctcatgtcactgcagaaggtgcaagtagaggacttctgctccag
tgtttgttggctctgtattctgagcatccaagcaatgcagtggaaagaaaagccaaccag
tggatacagaaagtcctgtgtcatctggctacagatgaagaagatggtgcagccttggga
ctgatgaagcatttaggagtgccgaccaaagaataccatcttaaagtgctgaaaaagatg
gtgacaagaatacaggaaagcattgggaatagacggtgttctgtgagcagcacaaataag
gggtgttcatgtggcagtatttgggctgtgtcagaggcttgtgtgcctctcatcacatgt
cctgaagcatctcctctcattggtgctttgctgcaacagcagatgacttgcatcagagaa
agtctgagtgaaaacttccttgatgctctacactctgcctactcgagatgcaacctgcta
ctggatgagcaggcagttgtttctctgtggtatcagagcttacccagcctggaggaagct
gtgctcaatctgttggagtctgctactacagcaggatcaacaccaagcaaggtggaggag
caagtgtcgaagtcattactgcctaaagcttgtgctcagcattgttcagtattcctggtt
gtaaatgacatcttcaggactgttcttaaacagaatgaaaggaatgagcgtgttaaaaat
gtttttcaaacatttaccaaatgcttcttcatggagctttcacaattgcagcctcagaca
tctgcatctttaaaagccttcttcccacagtcccctccaagtcttctgattcctctcttt
accatgccttcagagatgcctcaggagagtttgaaaaaccacctgatatgggtcagcagc
tcattacagagactgactgaggaggaagaagatgaggaagactcagatagtagcaatatc
agagggaaccataaagtctttgaggcgtggttcctgctggttcagtgtggctactgggtg
cagatggtggtccagctgctggtcacatcaggtcccgaagactgtggtccccttctctgg
ttactgaccttttatcatcaccccaccaacaggtggcaccacagagcttcacagctggtc
caggccaaagcagcgtgggaccacctgtacagtcttttctccattgtagctcatcttctt
cctgctgaccacctgcagtcttttatcagtctactggcaccgaaacctcagcagccgtcc
cttgccccgtcgttgacccttaaccttttggttaactttgctacttttggtcaacttcca
cagagcatatcagcagagattacacagaaggtggtgcatcagtctggtctgcaggacgaa
gcaacacgtgttctcagctcgctgcgtctcagactgaatgaccgaggcagcttcgcaaac
gacagagttcagctcaggatcgaggaacttcacaacacaataaaaaataaatgtaagcca
gatgcgccctcacaaactgacacatag
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