Xiphophorus couchianus (Monterrey platyfish): 114154646
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Entry
114154646 CDS
T05908
Name
(RefSeq) PDZ and LIM domain protein 2-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114154646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114154646
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
114154646
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Rpr2
Motif
Other DBs
NCBI-GeneID:
114154646
NCBI-ProteinID:
XP_027889745
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All DBs
Position
12:complement(22063322..22105273)
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AA seq
367 aa
AA seq
DB search
MALTLNLIGPSPWGFRIYGGRDFKKAITVSKVNGGSKAEKADLHAGDIILEINGENTADM
LNVEAQNKIKNSKTHLQLLVERPETPSSTETNGISSPEQLTGRFQEVVIVSRDENQNYSE
YKISSPTSQSPGPYSSYSPVSPERRGERLTPTINKSVQLRSWSPEDKNNSLSRPHSQEFF
PSDFRHPSGSSRTPTPPGRYSPHSPIDRDVPMSPRRSSSSSDFAMQRFDRNSEVYKMIQE
NKESRTPPRQSNTFKMLQEVLEADEKEAALRFPGKLSPNPPKQSTSVTGASKHHTCEKCG
TSIVTQAVRITDSSFRHPECYTCTDCGLNLKMRGHFWVGDVMYCEKHAKERYQGPGNSIQ
TTVSPRQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcactaacactgaacctgatcggcccctctccatggggcttcagaatatatggagga
agggacttcaagaaggccattaccgtatcaaaggtcaatggaggcagcaaggcagagaaa
gcagacctgcatgctggtgatatcatcctggaaatcaacggtgaaaacacagctgacatg
ctgaatgtggaggcccagaacaaaatcaagaactcaaagacccatctgcagcttttggtg
gagagacccgagactcccagctctacagagaccaacggcatcagcagccctgaacagctc
actggacgcttccaggaggtagtcatagtgagtcgagacgagaaccagaactacagtgag
tataaaatctccagtcctacgtcacagtccccaggaccctattcatcatattctcctgtc
agccctgaaagaagaggggaaagactgacaccaaccatcaacaagagtgtgcagctgcgc
tcttggtcaccagaggacaaaaacaacagtctgtccaggccgcactctcaggagtttttt
ccttctgacttcagacacccctctgggtccagcaggacaccaaccccaccaggacgctac
tcacctcacagccccattgaccgcgatgttcccatgtcccccaggcgcagtagttccagt
tctgactttgccatgcaaaggtttgacaggaactcggaggtgtacaagatgatccaggag
aacaaggagtcacgcacgccacctcgtcagtccaacacctttaaaatgctgcaagaagtg
ctggaggctgatgagaaagaggcagccctgcggtttccggggaagctttcccccaaccca
ccgaaacagagcacatctgttacaggagccagcaaacaccacacctgtgagaagtgtggc
acaagcattgtgacacaggcagtgcgcatcacggacagctccttccgtcatccggagtgc
tacacctgcacagattgcgggcttaacctgaagatgagaggtcacttttgggttggagat
gtaatgtattgtgagaagcatgccaaagagaggtatcagggcccaggcaactccattcag
accactgtgtccccccgccaatga
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