Xiphophorus couchianus (Monterrey platyfish): 114154669
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Entry
114154669 CDS
T05908
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114154669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
114154669
NCBI-ProteinID:
XP_027889782
LinkDB
All DBs
Position
12:complement(6940573..6995852)
Genome browser
AA seq
2491 aa
AA seq
DB search
MHIFLLVKLTFLLSLIGVTRGLRCSMPTESCLNQGRCEATPDGNGECKCLDGYVGSRCQF
HDPCNNMPCMNGGTCRAVSKGNTVDFNCTCGVGYSDRRCMTPINIACLSSPCRNGGTCEP
DGLLRFRCRCPPGWTGKDCATADPCASNPCANGHCSSVDSTFICTCTPFFFGQTCNQDIN
ECDTIPPRCKNGGLCINEVGGYRCQCPPEFTGKHCESRYLPCNPSPCLNGGTCIQKGETS
YECSCVPGFSGKNCNHNIDDCPGHECQNGGTCVDGVNTYNCQCKPEFTGQLCLDDVDECQ
LMPNACLNGGTCHNTYGSYQCVCVNGWTGDDCSENIDDCASAACYQGSTCHDRVASFYCE
CPHGRTGLLCQLKDACISNPCKKDSNCDTNPVTGNHICTCPSGFIGPSCDKDVDECSLGS
NPCEHAGKCLNTKGSFECKCQRGYMGTRCELDINECKSNPCKNEATCLDQIGDFQCICMP
GYEGEFCEIDTNECATSPCLNNGKCIDKINAFVCQCPTGFTGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCKCTEGYTGRHCETDINECYSNPCHYGSCIDGLASFSCSCNPGFTGRLC
ETNINECLSQPCRNGGTCLDRENAYICSCPKGTTGVNCEVNIDDCKGNLCDYGTCIDKIN
GYECICEPGYTGTMCNINIDECAINPCHNGGTCIDEVNGFTCVCLDGFQDPTCFSQVNEC
LSNPCIHGHCEDKINGYKCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGENCEILMAPCSSKPCKH
GGKCQESEDYLSFSCVCPEGWQGQACEVDIKECVKNPCRNGATCQNTLGSYRCGCKPGFT
GRNCETDIDDCNPNPCSNGGLCKDEVNSFLCSCLPGFRGLKCEEDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCLHGYTGLNCQNLVHWCDTSPCKNGGSCRQRGTT
YSCDCETGWTGLYCDVPSVSCEVAAKQRGVAVYQLCQNSGQCLDVGNRHYCRCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYSCKCMPGYLGPNCSEEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCNPSTDPVTKEPKCFNNGRCVDGVGGYHCICPAGYV
GERCEGDVNECLSNPCDPRGTRSCTQLTNNYRCECRTGYTGQRCDQVFNGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSQACGSLHCRNGGTCISGHNSPKCLCLPSFTG
PECQYPTDSLCNSSPCYNGGTCEYAAEAPFYRCVCPSNFNGFRCHILDYGFRGGFGQTIP
PPTDYEVACSIPECEELKHNKFCDARCNNHTCGWDNGDCSLNFDDPWKNCSAALQCWRYF
NNGKCDSQCDNAGCLYDGFDCQTLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGQLVVVVHITPNHLLNNSFGFLRELSRVLRTNVIFRKDTKGEMMVYPYY
GNEHELKKYNVKRSVDSLSEIPDKVLSVMKRSPYDVAGSGMRARRELDHVQVKGSIVHLE
MDNRQCFQQSNECFQSSDDAAAFLGALESSGKLDVPFTIEAVYSGVDLQPSDGLYAMYLV
LGSVGILAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNT
SDISLMDDNPNEWGEDEPVDVKRFKLDEQAVLDADDQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGAN
LHNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFSNREITDHMDRLPRD
IAQERMHHDIVRLLDEYNLVRSPPMHGGSLSSALSSPLCSPSGFLGGMKQPQPQSQGQGK
KTRKPSHKGIGCKDGKDMKVKKKNSQDGKSGTLLDSSAVLSPVDSLESPHGYVSDVASPP
MMTSPFQQSPSVSLNHLQGMADPHLAVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSAA
QGAMGGQCDWLARMHSGMSQAGQFNPLRAPPGGQSGLHQGMIAAPLHNGHPNSSLSQMMT
YQGLQNSRLGPQTHMMQQMQNLQQLHQQHQNSNPTSSQNFISGDLSSPELQQGAANSSMP
IHTILPQESQIMPSTQFLTPPSQHSYSGPMDNTPSHQIQVPDHPFLTPSPGSPDQWSSSS
PHSNMSDWSEGISSPPTSMQSQIGHISEQFK
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttttttgttagtgaaactaactttcctgctgtcgctgataggagtaacacga
ggtctgagatgctccatgcccacagagtcttgtttgaaccaggggaggtgtgaagctact
ccagatggcaatggagagtgcaaatgcctggacggatacgtggggagcaggtgccagttt
catgatccgtgcaacaacatgccatgtatgaacggaggcacgtgtcgggccgtctccaag
ggaaacacggtggacttcaactgcacctgcggggtgggctactccgaccgccgttgtatg
acgcccatcaatatcgcctgcctcagctcgccgtgccgcaacggaggcacctgtgagcca
gatggtctgctgaggtttaggtgccgctgcccacctggatggacaggtaaagattgcgcg
acagccgacccgtgtgcctccaacccatgtgccaacggccattgctcttctgtcgattcc
accttcatctgcacatgcaccccgttcttcttcggacaaacctgcaaccaagacatcaac
gagtgcgacaccatcccgccacgctgcaaaaacggcgggctgtgcatcaacgaggtcggt
ggctacaggtgccagtgtcctccggagttcacggggaagcactgcgagagccgctacctg
ccctgcaacccgtcgccctgcctgaatggaggcacctgcatccagaagggagaaaccagc
tacgaatgctcctgtgtgccaggattttcaggaaagaactgcaaccataacatcgatgac
tgtccgggtcacgagtgccagaatgggggcacgtgtgtggacggagtcaacacctacaac
tgccagtgtaaaccagaatttacaggccagctctgcctggacgatgtcgatgagtgccag
ctcatgcccaacgcttgcctgaacggcggcacatgccacaacacatacggcagctaccag
tgcgtgtgcgtgaacggctggaccggcgacgactgcagcgagaatattgacgactgtgcc
agcgcggcgtgctaccagggatccacctgccatgaccgcgtggcttctttctactgcgaa
tgtccccacggccgcacaggtctgctgtgccagctgaaggacgcctgcatcagtaaccca
tgtaaaaaggactccaactgcgacaccaaccccgtcacaggaaatcatatttgtacctgc
ccttcgggattcatcggtccttcctgtgataaggacgtagacgaatgctctttgggttcc
aacccgtgtgagcacgctgggaagtgcttaaacaccaagggctcgttcgagtgtaagtgc
cagcgggggtacatgggaacgcgctgcgagctggacatcaacgagtgcaagtccaacccg
tgtaagaacgaagccacctgcctggaccaaataggagacttccaatgcatctgcatgcca
ggctacgagggagagttctgcgagatcgatacgaacgagtgcgccaccagcccctgcctc
aacaacggcaagtgcatcgacaagatcaacgctttcgtctgccagtgccccacaggcttt
actgggaatctttgccagatagacatcgatgaatgtgccagtacaccatgcaaaaatggc
gccaagtgcacagacgggcccaacaagtacacttgcaagtgcaccgaaggttacactggg
aggcactgtgagacggacatcaacgaatgttactcgaacccatgccactacggctcctgc
atcgacggcctggcttcgttcagctgtagctgcaaccccgggttcaccggcaggctgtgt
gagaccaacattaacgagtgtctgagccagccgtgccggaacggaggcacctgcctggac
cgagagaacgcctacatctgcagctgccccaagggaaccacaggagtcaattgtgaagtc
aacattgacgactgcaaggggaatctctgtgactacgggacctgcattgacaaaatcaat
ggctatgagtgtatttgtgaacctggctacactggtacgatgtgtaacatcaacatcgac
gagtgtgccatcaatccctgccacaacggtggcacctgcatcgacgaagtcaacggtttc
acctgcgtttgtctggacggcttccaggatcccacctgcttctcccaagtcaacgagtgc
ctcagcaacccctgcatccacggtcactgcgaggacaaaattaacggctataaatgcctg
tgtgactctggctggagcggcaaaaactgcgacatcaacaacaacgagtgtgagtccaac
ccttgtatgaacggagggacctgcaaggatatgaccagcggttacgtttgcacctgtcgg
atgggtttcacgggaccaaactgccagacaaacatcaacgaatgcgcctccaacccctgc
ctgaaccaggggacctgcatcgacgacgtcgccgggtacaagtgcaactgtgtcctgccg
tacaccggagaaaactgtgagatcttgatggctccctgcagctccaaaccctgtaaacat
ggaggaaaatgtcaggagtcggaggactacctgagcttttcctgtgtctgtcctgaagga
tggcaaggtcaagcatgtgaagttgacatcaaagaatgcgtgaagaatccttgtcgcaac
ggagcaacatgccaaaacactttgggcagctaccgctgcggctgcaaaccgggctttact
ggacgcaactgtgagaccgacatcgatgactgcaatcccaacccctgcagcaacggaggc
ctttgtaaggacgaggtcaacagcttcctgtgttcctgcctgcctgggttccggggactg
aagtgcgaggaagacatcaacgaatgcgagagcaatccgtgcaggaatggagccaactgc
accgactgcgtgaacagctacacctgcacctgcccgcctggcttcagtgggatccactgt
gaaaataacacacctgactgcacagagagctcctgttttaatggaggaacttgcgtagac
ggcatcaacaccttcacctgtttatgtccgcccggcttcactggcagctactgccagcat
gacatcaacgagtgcgactccaaaccctgtctgaacggcggcacatgtcaagacagttat
ggcacatacaagtgcacctgtctacatggttacacaggactcaactgtcagaacttggtt
cattggtgtgacacgtctccctgtaaaaatggaggatcttgccggcagagaggaaccact
tacagctgcgattgtgagaccggctggactggcctgtactgtgatgtcccgagtgtttcc
tgtgaggttgcagccaaacaaagaggagttgctgtttaccaactctgtcaaaactcgggt
cagtgtctggatgtgggaaaccgccactactgtcgctgtcaggtgggatacactgggagt
tactgcgaggagcaggtggacgagtgtacgccgaacccctgccagaacggagctacttgc
actgactttctgggtggatactcctgcaagtgcatgccaggatacttggggcccaactgt
tctgaggagatcaatgagtgtttctcccaaccgtgccagaatgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccccgaggaacccaaggtgttcactgcgagatc
aacgtggacgactgcaacccgtccaccgaccccgtcaccaaagaacccaagtgcttcaac
aacggcaggtgtgtggacggcgtgggaggctaccactgcatctgccccgcggggtacgtg
ggcgagcgatgcgagggggacgtcaacgagtgtctgtccaacccctgcgacccgcggggc
acgcgcagctgcacccagctgaccaacaactaccgctgcgagtgtcgcaccggatacaca
ggacagcgctgtgaccaagtgtttaatggctgtaagggtaaaccttgccgtaatggaggc
acctgtgctgtagccagtaacacgccgcatggcttcatctgcaaatgtcccccaggtttc
actggctccagctgtgaatatgactctcaggcctgcggcagcctccattgtcgcaacggg
ggcacctgcatctctggccacaacagtccgaagtgtttgtgtctgccgtcgttcactggg
cctgagtgtcagtaccccaccgacagcctctgcaactccagcccctgctacaatggcggc
acgtgtgaatacgccgccgaggctccgttctaccgctgcgtctgcccctccaacttcaac
ggcttccgctgccacattttggactacggcttccgcggaggcttcggccaaaccatcccg
ccgccgacggactacgaggtggcctgcagcatcccagagtgcgaggagctgaagcacaac
aagttctgtgacgcgcgctgcaacaaccacacgtgcggctgggacaacggcgactgctcg
ctcaacttcgacgacccgtggaagaactgctcagccgcgctgcagtgctggcgatacttc
aacaacgggaaatgcgactcgcagtgtgacaacgccggatgtctctacgacggctttgac
tgccagactttggagggacagtgcaatcctctgtatgaccagtactgtaaggaccactac
gctgacggccactgtgaccagggctgcaacaatgcagagtgcgagtgggacggcttggac
tgcgccaacaacatgcctgagaagctcgccgtgggccagctggtcgtggtcgtccacatc
acccccaatcatctcctcaacaactccttcggcttcctgcgcgagctgagccgcgtcctc
cgaaccaacgtcatattcaggaaggacacaaagggggagatgatggtctacccgtactac
gggaacgaacacgagctcaagaagtacaacgtcaagcgttcggtggactctttgtctgag
attcctgacaaggtgctgagtgtgatgaagaggagtccgtatgacgtggcaggcagcggc
atgagagccaggagggagcttgatcatgtgcaagtcaaaggatcaatcgtccacttggag
atggacaaccgtcagtgcttccagcagtccaacgagtgtttccagagctccgatgacgcc
gctgcgttcctcggagcattggagtccagcggcaaactggatgttccctttactattgaa
gctgtttacagtggcgttgacctgcagccgtccgacggactctacgccatgtatttggtg
ctgggcagcgtcgggatactggccttccttggagtgggaatggtggcagcccgaaagcgg
cgccacgagcacgggcgcctctggcttcccgagggtttcaagaccacagagaccagcaag
aagaagagacgggagcccgtcggagaggactcagtcggactgaagccactgaaaaacacc
tctgatatttctctgatggacgacaacccaaacgaatggggagaggacgaacccgtggat
gtgaaacgcttcaaacttgacgagcaggcggtgctggacgccgatgaccagacggaccac
cgccagtggacccagcagcacctggacgccgctgatctgcgcatcccctccatcgctccc
actccccctcagggggagatcgaaaacgactgcatggatgtcaacgtgcgagggccagat
gggttcaccccactgatgatcgcatcctgcagcggaggaggattggaaacgggcaacagc
gaggaagaggaggacgcctctgccaacgtcatcaacgacttcatctaccagggcgctaac
ctgcacaaccagaccgaccgtaccggcgagacggctcttcacctggcggctcggtacgcc
cgctctgacgctgccaaacggctgctggaggccagtgccgacgccaacatccaggacaac
atgggccggacgccgctgcacgccgccgtggccgccgacgcccagggagtctttcagatt
ctgatcaggaaccgcgccacagatctggacgcccgcatgcatgatggcaccacacccctg
atcttagctgccaggctggcagtggagggcatggtggaggagctcatcaactgtcacgca
gatgtgaatgccatcgatgactttggtaaatcagctctacactgggctgcagcagtaaat
aatgtagaggctgctattgttctactaaagaatggagccaacaaggacatgcagaacaac
aaggaggaaactcctctgttcctggctgccagagaaggaagctatgaaactgccaaggtc
ttactggaacatttctcgaatagagaaattacggaccacatggaccggctccccagggac
atcgcacaggagcggatgcaccatgacatcgtgaggctgctggacgagtacaacctggta
cgaagcccccccatgcacggcggctccctgagcagcgccctgtcctccccgctctgctca
cccagtggctttctgggcggtatgaagcagccgcagcctcaaagtcaaggccaggggaag
aaaacccgcaagcccagtcacaaagggattggctgcaaagatggcaaagacatgaaggtg
aagaagaagaactctcaggacgggaagtctgggactctcctggacagctcagctgtcctg
tcgcccgtagactcgctggagtctcctcacggttacgtttctgacgtggcgtccccgcca
atgatgacctccccgttccagcagtcgccgtccgtgtctctgaaccacctgcagggcatg
gcggacccccacctggccgtgaaccacatggtgatgcccaacaagcaggagctggcccgg
atgcagttcgacccgctgcctccccgcctcacccacctgccggtgtccggctcggccgca
caaggcgccatgggcggtcagtgcgactggctggccaggatgcacagcggcatgagccag
gcggggcagttcaaccctctgagagcgccccccggaggccaaagcggccttcaccagggg
atgatcgcagcgccgcttcacaatggccaccccaactccagcctgtcgcagatgatgacc
taccagggcctgcagaacagccgactgggcccgcagacccacatgatgcagcagatgcag
aacctgcagcagctgcatcagcagcaccagaactctaacccgaccagcagtcagaacttc
atcagcggggatctcagttcccctgagctccagcagggggcggccaactccagcatgccc
atacacaccatcctccctcaggagagccagatcatgcccagcacccagttcctaactcct
ccctcccagcatagctactccggcccgatggacaatacccccagccatcagatccaggtg
ccggaccacccgttcctgaccccatcacccgggtcccccgaccagtggtccagctcgtcc
ccccactccaacatgtccgactggtcagagggcatttccagcccaccgacgagcatgcag
tcccagatcggacacatatcagaacagttcaagtag
DBGET
integrated database retrieval system
