Xiphophorus couchianus (Monterrey platyfish): 114154729
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Entry
114154729 CDS
T05908
Symbol
rph3a
Name
(RefSeq) rabphilin-3A isoform X1
KO
K19938
rabphilin-3A
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114154729 (rph3a)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114154729 (rph3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PI3K_C2
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
114154729
NCBI-ProteinID:
XP_027889876
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Position
12:complement(23037649..23062788)
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AA seq
629 aa
AA seq
DB search
MTDTVMSGGSGRWVSNDRQRSMRPSDKEQGNWTMQSGSGPGPDLTDEEKEIINNVIARAE
KMEAMEQERIGRLINRLDDMKKTVCGDGVSRCLLCGEQLGSPGVSSVVCEDCKKNMCTKC
GTQCGSRTRPVWLCKICREQREVWKRSGAWFFKGFPKQFLPSPMPLSKPKETAPHEAAEP
QKPREAAAQPKPPGSHQSQTSASEEQVSGAQMQARAGYPPVAPKLAMRMGAGGVGPEEAG
QGSPVVMKKMVPVHSSRAQPAASAAMSQQGPVAGDVGAYASEQRAPPAVREDRKQPAAYS
TPPPRQQPPPADDEEEANDYDSDEATTLGSLEFGLFYDQESNSLQCSILKGKGLKPMDSN
GLADPYVKLHLLPGASKSNKLRTKTLRNTRNPMWNETLTYHGLTDEDMQRKTLRLSVCDE
DKFGHNEFIGETRVALKKLKMNQKKNFNVCLERVVPTKRTATAGGARGIALYEDEPGKEG
TDAEERGRILMSLMYSTQQNRLIVGVVRCVHLAAMDANGYSDPYVKICLKPDMGKKGKCK
TQIKKRTLNPEFNEEFSYDIKHSELAKKTLDISVWDYDIGKSNDYIGGCQLGITAKGERL
KHWYECLKNKDKRIERWHTLVNENHIVSD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacagtaatgagcggtggttcaggtcgctgggtgtccaacgaccggcagagg
agcatgcgtccgagtgataaagagcaggggaattggacaatgcagtctggctctggtcct
ggtccagacctaacagatgaggagaaggagattataaacaatgtgattgcccgcgctgag
aaaatggaggccatggagcaggagagaattgggcgcttgataaaccgcctggatgacatg
aagaagaccgtgtgtggggacggtgtttctcgctgcctgctgtgtggggagcagctgggc
tcgcctggggtcagctccgtcgtgtgtgaggactgcaaaaagaacatgtgcacaaaatgt
ggcactcagtgtggcagtcgaactcgccctgtgtggctgtgcaagatctgcagagaacag
cgagaggtatggaagaggtccggtgcctggttcttcaaaggctttccaaagcagttcctg
ccgtcgcccatgccgttgtctaaaccgaaggagacagctcctcatgaggcagcagagcct
cagaagccgagggaggcagcagctcaaccaaaaccaccaggttcccatcagagtcaaact
tcagcctctgaggaacaggtttcaggtgcgcagatgcaggcccgtgctggttacccacct
gtggcccccaaactagctatgcgtatgggtgcaggaggagttggtcctgaagaggcgggt
cagggaagtccggtagtgatgaagaagatggttccggtgcacagctccagggcacaacct
gctgcttcagcggcaatgtcccagcagggtcctgtggcaggagatgtgggtgcttacgcc
tcggagcagagagcacctcctgctgtaagagaggacaggaagcagccggctgcctacagc
acgccccctccacgacagcaacctcccccagctgatgatgaggaggaggccaacgactac
gactctgacgaagccacgactctgggctctcttgagtttggccttttctacgatcaggaa
agcaacagcctccaatgtagcatcctcaaaggaaagggcctgaagccgatggactccaat
gggctcgcagatccttatgtgaagcttcatctgcttcctggggctagtaagtccaacaag
ctgcgtacaaagaccctgagaaacactcgcaatcctatgtggaatgaaacgctcacctac
cacggcctgaccgacgaagacatgcaacgtaaaactctcaggctctctgtctgcgatgaa
gacaagtttgggcacaatgagtttattggcgagacccgggtagcactgaagaagctgaag
atgaatcagaagaagaacttcaacgtctgcctagagagggttgtgcctacgaagagaact
gcgacagccggaggagcaagagggattgcgctctacgaagacgagccagggaaggagggc
acggatgcagaggagcgcggtcgcattctgatgtccctcatgtacagcacccagcagaat
cgcctcatcgtgggggtcgtacgctgcgttcacttggctgccatggatgctaatggatac
tctgatccatatgtcaaaatatgcctgaaacctgacatggggaaaaagggcaagtgcaaa
acacaaatcaagaagaggactttaaacccagagtttaacgaggaatttagctacgacatc
aaacacagtgaactggccaagaagacattagacatctctgtgtgggattatgacattggg
aagtccaatgattacataggtggctgtcagctgggcatcaccgccaaaggagagaggctg
aagcactggtacgagtgtttgaagaacaaggacaagaggatcgagcgctggcacacctta
gtgaacgagaatcacattgtcagcgattaa
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