Xiphophorus couchianus (Monterrey platyfish): 114154757
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Entry
114154757 CDS
T05908
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114154757 (snapc4)
03021 Transcription machinery [BR:
xco03021
]
114154757 (snapc4)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
114154757 (snapc4)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
114154757 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
PRP1_N
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
114154757
NCBI-ProteinID:
XP_027889925
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All DBs
Position
12:1343888..1353643
Genome browser
AA seq
1377 aa
AA seq
DB search
MSLSAQRDRVQRQVEELERSLAVTRDELDLLSSETDDGSESQDEEGQEGQSPADLLAQKQ
KIQSEIQNLEDMLGPHSESLDVSSEDSSDSSDRTEPDLSPSASSCLQLNLVYQQVVQETL
DQLEALLAHNRRQQRELTAQMNGPIRESTREGPASSNQHPAKMFLGSFLKPYFKDRLTGL
GPPANQEVKLKAQRMMGCPEDKKLKLKRWESWQKTLLVHSVTRDHLKRLMLPKLSRLDFL
TSKFSSAQGADRQQLTEQINDLEKDLQLLRMKREEELTGDRYEEHDWQKISNIDFEGTKD
AEDIRLFWQNVLHPSINKTAWSSEEVQRLSAICRRHEDRHWDSIAQELGTGRTAFMCLQM
FQRFVSDSLKRSSWTAEEDEQLRELVQKMRIGNFIPYTQISYFMEGRDPTQLVYRWNQVL
DPSLKRGSWTKQEDRLLLQAVARHGEKCWWKVRLEVPGRTDGACRDRYLDCLKKNIKKGP
FERHEVELLEQLVKKHGVGRWAKIAAEIPHRLDAQCLREWRKLVREPAQDRRKIRKTCKK
GGRGRGRGRGAGGFNVSIRRGILKMKEEEEVQVTEDEDEDEDEVVQYMDSDEDCNKKRKR
SMEEEEEEEEEYILPPMEEWLPAEVKQSSTSLSFTLVELPSSGEAPDRTAVRSTVLGRPG
PSVVIGAPPRELSWEERRSSSAVPMASREALRLHLSALKQKVGSAPQPGRRPRPQAQELR
YELQVAVTPWIGNLLIPKSQKRSAADALREAGERSGVSTSSAFTLLLQAMNVDTLGCRQM
IEERKSKADLQAPPHARGPKRVSELLANRRSQEEEDQRRVLLQEKRILQAPPIMQAPPIL
QAPPQHPSSRYPQMFPRSLLVPAASIYFVPSGAPPAPPAPPAPVLPNPEPSCTSSSVVPV
GSSLTSSLARGSPAELKDVGGASDGAAGSRSDVGGAKAGVARTGDEGAKNGADLETGPMD
SAGSPEPDRTQNSDGPAAVSSSSSPLTSAPPSCPVQTPPTSTDAAVRQSGGRKRGLAEAG
GAGPVQEGKRTRRPTLKIQESKELQATKKRSSASSKQKRVGRAQSKESSAMEAPPHSQAP
PLSQVTGLHFLPNRSIWVMTPGSVPVAQAPPPALQVGLLPRGPPLISEAPPPLTAGLSSV
TPADPRDLQLLPVPTCRFKPLLPAVIQSPDLRPTGWPRPHLLLAYQGAAGRQTVGPTGPP
LPTAGLHFDPTLMCLEPPEEVHDWLRGRGGVVVPGARCALPYLPPSVSSLSALSGLLRAK
ASVTASALQLMADGRRPNDHTYCASGELPGRQEELQAVRQLVAQRFSTNPAHQLLKARFL
SLFTLPALLATVQPISRKKPTCPTNQEEEEEEEEEELKQIQERQRRRRRVLTGAAVP
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgtcggcccagagggaccgggtccagaggcaggtggaggagctggagcgcagc
ctggctgtgacccgggacgagctggacctgctgagcagtgagacggatgatggatcagaa
agtcaggatgaggagggacaggagggacagagcccagctgacctgttggcccagaagcag
aagatccagtcagagatccagaacctggaggacatgttgggtccccacagcgagtccctt
gacgtgtccagcgaggacagcagtgactcaagtgacaggaccgagccggacctgtctccg
agtgcgtcctcgtgtctccagctgaacctggtctaccagcaggtggtccaggagacgctg
gaccagctggaggcgctgctggcccacaaccgcaggcagcagagggagctcacagcccag
atgaatggaccaatcagagagtccaccagagaaggtcccgcctcgtccaatcagcatcca
gctaagatgttcctgggaagcttcctgaaaccgtacttcaaggaccgtctgacgggcctg
ggccctccagccaatcaggaggtgaagctgaaggctcagaggatgatgggatgtccagaa
gacaagaagctgaaattgaaaagatgggagagctggcagaagacgctgctggtccactca
gtgactagagaccacctgaagagactgatgctgcccaaactgtccaggctggactttctg
acctccaagttttcctcggctcagggagccgacagacagcagctgactgagcagatcaat
gacctggagaaagacctgcagctgctgaggatgaagagagaggaggagcttactggtgat
cgctacgaagaacacgactggcagaagatctccaacatcgactttgaagggacgaaggac
gcagaggacatccgtctgttctggcagaacgtcctccacccgtccatcaacaagacggcc
tggagcagcgaggaggtccagagactgagcgccatctgcaggagacacgaggacagacac
tgggactcgatcgcccaggagctggggacgggcaggacggccttcatgtgtctccagatg
ttccagcgtttcgtctccgactctctgaaacgcagcagctggacggcggaggaagacgag
cagctgagagagctggtccagaagatgaggatcgggaacttcatcccgtacacgcagatc
agttacttcatggagggtcgtgatccgactcaactcgtctacaggtggaaccaggttctg
gacccgagcctgaagagaggctcgtggaccaagcaggaggaccggctcctgctgcaggct
gtggctcgtcacggcgagaagtgttggtggaaggtccggttggaagttcctggacgcacc
gatggagcctgcagagacaggtatctggactgtctgaagaagaacataaagaaaggtccg
tttgagagacatgaggtggagctgctggagcagctggtgaagaaacatggagttggtcgc
tgggccaagatcgccgcagagatccctcatcgcctcgatgctcagtgtctgagagagtgg
aggaagctggtgcgagaacctgctcaggacagaaggaaaatcaggaagacctgcaagaag
ggaggaagaggaagaggaagagggcggggtgctggaggtttcaatgttagcatcaggaga
ggaatattgaagatgaaggaggaagaggaggtgcaggtaactgaggatgaggatgaggat
gaggatgaggtggtgcagtacatggacagtgatgaagactgtaataagaagaggaagagg
agcatggaggaggaggaagaagaggaggaggagtacatcctgccgccgatggaggagtgg
cttccagctgaggtgaagcaaagctccacctccctgagcttcacgctggtggagctccct
tcctccggcgaggctccggaccgaaccgcggtccgctccaccgtgctgggtcggcccggg
ccctccgtcgtcatcggggctccgcccagagagctgtcctgggaggagcgccgcagctcc
tccgccgtgccgatggcgtcccgggaggcgctgcgtctccacctgagcgccctgaagcag
aaggtcggctctgccccccagccggggcggcggccgcgcccgcaggcccaggagctgagg
tacgagttgcaggtcgccgtcacgccgtggatcgggaacctgctgatcccaaagagccag
aaacggagcgccgcagatgcactgagggaggcaggagagaggagcggcgtctccacctcc
tccgccttcacgctgctcctccaggccatgaacgtagacacgctgggctgccggcagatg
atcgaggagaggaagagcaaggcggacctgcaggccccgccccacgcccgggggcccaaa
cgggtctcagagctcctcgccaacaggaggagccaagaggaggaggaccagcggcgagtc
ctgctgcaggagaaacgcatcctgcaggctccgcccatcatgcaggctccacccatcctg
caggctccaccccagcacccttctagcagatatcctcagatgtttcctcgtagtctccta
gtccctgctgcctccatctactttgttccttctggagctccacctgctccacctgctcct
cctgctcctgtgctcccaaaccccgaaccatcctgcacctcctcctcagtggttccagtt
ggctccagtctgaccagtagccttgctcgaggaagtccagcagagctgaaggatgtgggc
ggagccagtgatggagcagctgggtctcgtagtgatgtgggcggagctaaagcaggtgtg
gcacggacaggtgatgaaggagcaaagaacggagcggatctggagactggacccatggat
tcagcaggttctccagaaccggaccggacccagaactcagacggtcctgcagcagttagc
tcttcctcctcacctctgacctctgctccaccttcttgccccgttcagaccccgcccacc
tccacagacgccgccgtccgtcagagtgggggcaggaagagggggctggcggaggcgggc
ggcgccgggccggtccaggaggggaagagaaccaggaggccgaccctgaagatccaggag
tccaaggagctccaggctacaaagaaaagaagctccgcctcctctaagcagaaacgtgtt
ggcagggcccaatcaaaggaaagcagtgccatggaggccccgccccactctcaggccccg
cccctctctcaggtcactggtctccatttccttcctaaccggtccatttgggtcatgacc
cctggttcggtccctgtggctcaggctccgcccccagccctgcaggtggggctcttaccc
agaggtcctcccctaatttctgaagccccgccccctctgacggcaggactgtcctcggtg
accccagctgaccctcgtgacctccagctcttacctgttcccacctgtagatttaagccc
ctcctcccagccgtcatccagtcacctgatctgaggccgaccggctggccccgcccccac
ttgctgctggcctatcagggagcggcggggaggcagacggtgggcccgaccggccccccc
ctcccgacggcgggcctccactttgaccccaccctgatgtgtctggagcccccagaggag
gttcacgattggttgagagggagagggggcgtggtcgtacctggagcgaggtgcgccctc
ccctacctgccgccatctgtcagcagtctgagcgcgctcagtggcctcctgcgggcgaag
gcgtcagtgacggcgtcggctctgcagctgatggcggacggccgccgccccaatgaccac
acctactgcgcctcaggcgagctgccagggcggcaggaggagctgcaggccgtccgccag
ctggtggcgcagcgcttctccacaaaccccgcccaccagctgctgaaggcccgcttcctg
tccctgttcacgctgccggcgctgctggccaccgtgcagccaatcagcaggaagaagcca
acctgtccgaccaatcaggaggaggaagaggaagaggaggaggaggagctgaaacaaatc
caggagagacaaaggaggaggaggagagtcctgaccggagctgctgttccctaa
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