Xiphophorus couchianus (Monterrey platyfish): 114154853
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Entry
114154853 CDS
T05908
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114154853 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114154853 (ube3b)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114154853 (ube3b)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
HECT type E3
114154853 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
114154853
NCBI-ProteinID:
XP_027890095
LinkDB
All DBs
Position
12:complement(17445601..17457412)
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AA seq
1070 aa
AA seq
DB search
MFSVPQSSKSEFLDKARQAREERKGHKEKEKAATQIQALVRRFLCRCRLQKQTRKEVDDY
FQLSEAGTTKRNALSIFKIARKLLFIYRLEDKMRFEKLCRAILASMEVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWICCQLLKNLKPDILQDNKLVTLYLTMLVTFTDTSTWRIVRGK
GESEALRPALTRICENIMGHLNQKGFYSTLQILLTNGLARSKPSLSKGTLTAIFSLSLRP
VIAAHFSENLLRSFLLHIMSVPAVVSHLSVLTPECMALIQTHDLLRKFILFLSREEQCLD
ICVCLEGSHSLCLLGNLIQLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHW
HPVLGWFSQTVDYGLNESMPLVTKQLQHLWGVSVIRTLFSDVLSKKLESQESTPPPPQPS
TSQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTTLSTLTQIR
LQILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRH
LITILDDIEVYEEQTSFKIEELITISSFLNTFVYKMIWDGILENAKGEKLELFHSVHGWL
MVLYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFR
NIVTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDL
GVDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFV
GKMLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDG
DVGDLGLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAA
FIRGFRNIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWD
ILSSDFNAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGF
FTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgtccctcaaagctccaagtccgagttcttggacaaagccaggcaggccaga
gaggaaagaaagggacacaaagagaaggagaaagcagcaacccagatccaggctctggtg
aggagattcctctgtcgctgcagactccagaagcaaaccaggaaagaggttgatgactat
tttcaactttctgaagcggggacaacaaaaagaaatgcactttcaattttcaaaattgct
cgaaaattgctattcatatatcgccttgaggataagatgagatttgagaagctatgtcga
gcaattctggccagcatggaggttgaaaacgaacctaaagtctggtatgtttctttggct
ctctccaaagacctcactattccctggctgaaacagatcaaagatgtcctctggatctgc
tgtcagttactgaaaaaccttaagcctgacatacttcaagacaacaagctggttacactg
tacctcaccatgctggtgaccttcactgacacgtcaacatggcggatagtccgaggaaag
ggtgagagtgaggctctgagacctgctttgacaaggatttgtgaaaatattatggggcat
ctaaatcagaagggattctactcaacattgcagatcctgttgaccaatggtttggcccgg
tctaaaccgtctctctctaaaggcaccctgactgctattttctctttgtctctgaggcca
gtcattgcagctcacttttcagagaacctgctccggtccttcctcctccacatcatgtcc
gttcccgccgtggtgtcccacctcagtgtcttgactccagagtgcatggcattaatccag
acccatgacctcttgcggaagttcattttgtttctgagccgggaagaacaatgcctagac
atctgtgtgtgtcttgagggcagccactcgctctgcttacttggaaacctaatccagttg
ggttacctcaacgagaaagtcttagaagaagaggccaaccattttgtgaaggacctgact
gacatgttgtcatactgccaaagatacgtatcacaaaagaagtccaacctaacgcattgg
catcctgtcctgggctggttctctcagactgtggactacggtctgaatgaatcgatgcct
ctggtcactaagcagcttcagcacctgtggggcgtatctgtcattcgaactctcttcagt
gacgtcctctccaagaagctggagagtcaggagtccaccccaccgccgccgcagccgagc
acgtctcaaaacaatctacccgtaaagaatctttttaagagagcgtttcagaagtcggct
tctgtgaggaacattctgaaacctgtcggagggaagcgggtcgactcagctgaagttcag
aaagtgtgcagcatctgtgtgctctaccagacgactctgtccacgctgacgcaaatacgc
ctccagatactcaccggtctgacacatcttgacgaccttttaccaaaactgtgggctttc
atctgtgagcttggtcctcaggggggcctcaagcttttcatggagtgtctgaacaacgat
acagaggagtcgaaacagctcctggctatgctgatgctgttctgtgactgctctcgtcac
ctcatcacaattttggatgacattgaagtatatgaggagcaaacatccttcaaaatagag
gaactcatcactatctcctcttttctgaacacatttgtgtacaagatgatttgggacggc
atcttggaaaatgcaaaaggagaaaagctggagctctttcacagcgttcatggttggctg
atggtcctgtatgaacgggactgcaggcgcaggttcacccccgatgaccactggcttcgc
aaggacctgaagccgagcttgttgttccaagagctggaaaaagggaaaaaaagagctcaa
cttctactgcagtacatcccacatgttatcccacataaaaatagagtgctgctgttcaga
aacatcgtcacaaaggagaaagaaagtttagggttggtagaaaccagctcggcttctccg
cacgtcacccatatcactattcgccgctcacggatgctggaagacggatacgaccaactc
cgcaggttaccagtgaactccataaaaggcgtcattcgtgtcaagtttgttaatgacctg
ggagtggacgaggctggaattgaccaggatggggtcttcaaagagtttctagaggagatc
attaagaaagttttcaatcctgccctcaacctgttcaagactacaagtggaaatgaaagg
ctgtatccctcacccacatcctatattcacgagaatcacttgcagctctttgagtttgtt
gggaagatgctcggtaaagctgtttatgagggcatcgttgtggatgttccttttgcctcg
ttcttcctcagtcaagtcctgggacaccaccacagcaccttctacagctccatagacgag
cttccctccctggactctgagttttacaaaaacctcacttccattaagcgctatgacgga
gatgtgggagatctaggactgacattgtcctatgatgaagatgttatggggcagcttgtc
tgtcatgagttgatacctggaggaaagactatgccagtcaccaatgaaaacaagatcagc
tacatccacctgatggctcacttcaggatgcacacgcagattaaggagcaaacggcagct
ttcatccggggttttcgcaacatcattaatccagagtggctgcacatgttttccacacct
gaagttcagcggctgatctcaggggataacgcagagattgatctagacgacctcaagaaa
cacactgtctactatggaggtttccatagcagccaccgtgtcatcatctggctttgggac
atcctgtccagtgactttaatgctgaagagagggctatgttcctgaaatttgttaccagc
tgctcaaggccacctcttctaggctttgcttacctcaaaccacctttctccatccgttgt
gtggaagtctcagatgatcaggacacaggagacaccctcggcagtgtcctcaggggcttc
ttcacaattcgaaagaaggagcctgggggtcgacttcccacttcttctacgtgtttcaac
cttctcaagctgcccaactacagtaagaagagcatcctgcgtgacaaactgcgttacgcc
atcagtatgaatacaggcttcgagctctcctaa
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