Xiphophorus couchianus (Monterrey platyfish): 114154936
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Entry
114154936 CDS
T05908
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
xco03410
Base excision repair
xco03420
Nucleotide excision repair
xco03430
Mismatch repair
xco04110
Cell cycle
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114154936 (pcna)
03410 Base excision repair
114154936 (pcna)
03420 Nucleotide excision repair
114154936 (pcna)
03430 Mismatch repair
114154936 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114154936 (pcna)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114154936 (pcna)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
114154936 (pcna)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
114154936 (pcna)
MMR (mismatch excision repair)
Other MMR factors
114154936 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
114154936 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
114154936
NCBI-ProteinID:
XP_027890254
LinkDB
All DBs
Position
12:complement(10035439..10039086)
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHIKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggctcgcttggtccagggctccatcctgaagaaggttctggaggcgctgaaa
gacttgatcacagaggcctgttgggatgtcagctcgtccggcatctccctccagagcatg
gactcgtcgcacgtctccctggtgcagctcaccctgcggcatgatggcttcgactcttac
cgctgcgacagaaacttggcgatgggggtcaacctcagcagtatgtcaaagatcctgaag
tgtgcaggaaacgaggacatcatcaccctcagagcagaagacaacgcagacacgctggct
ctcgttttcgaaaccctcaatcaggagaaagtctcagattatgagatgaagctgatggac
ttggatgttgagcagcttggtattccagagcaggagtacagctgtgtggtgaagatgccc
tctggagagtttgcccgtatctgccgcgacctgtcccagatcggcgacgccgtcatgatc
tcctgcgccaaggacggcgtgaagttctctgcctccggagagctgggtaccggaaacatc
aagctgtcccagaccagcaatgtggacaaagaggatgaggctgtcacaattgagatgaat
gagccggtccagctgatctttgccctgaattacctgaacttcttcacaaaggccacaccg
ctgtccaaaaccgtcaccctcagtatgtctgctgacattcccctcgtggtcgagtataag
atcgccgatatgggacacatcaagtactacctggccccgaagatcgacgaagaggcttcc
taa
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