Xiphophorus couchianus (Monterrey platyfish): 114154940
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Entry
114154940 CDS
T05908
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114154940 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114154940 (xrcc4)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114154940 (xrcc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
Shugoshin_N
Mat89Bb
Efg1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
114154940
NCBI-ProteinID:
XP_027890269
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All DBs
Position
12:18707601..18734044
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AA seq
272 aa
AA seq
DB search
MSGTVQQITLNPGIPYFLRVDWAVDLGAGFTLALTDGSSAWIGEVSEDEMTREANVMGVI
REKYVEDLLQALTKGEERVGGKRNGKEEYSFCLSLDHNLLSYQKICNNILIHLGSVELQP
APNSVELIREMIGKSLQHRADLETENSRLLEENCTLRQDHQRILKELEQQVKHKEMLEKE
MYSRFVMVLNEKKAKIRGLQETVQQLSHTDEQQKEDERRQSDGEASQSEDGGHPSQESTI
LIKDCSLMSQGVPIHQRFSDDEERETEETVAS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacggttcagcagattactctgaatccaggcatcccctacttcctaagagtt
gactgggctgtggacctgggtgctggattcacattagctcttactgacggaagctcagcg
tggatcggagaagtttcagaggatgagatgacaagagaagccaatgtcatgggagtcata
agggagaaatatgttgaagatcttcttcaagctctaacaaaaggtgaagaaagagtggga
ggaaaacgaaatgggaaagaggagtattctttttgcctctctttggatcacaatcttctt
tcatatcagaagatctgcaacaacattttgatacacttgggctctgtggagcttcagcca
gcaccaaactctgtggagctcatccgggagatgatcgggaagtctctgcagcacagagca
gatctggagacagaaaattcaaggctgttagaggagaactgtacactgagacaggatcac
cagcgtatactgaaagagctggagcagcaggttaagcataaggagatgttagaaaaggaa
atgtattcgcgttttgtcatggtgttaaatgagaagaaagcgaagatcagaggactgcaa
gagaccgtccaacagctcagccacactgatgagcagcagaaagaggatgaaagaagacaa
agtgacggtgaggcctctcagagtgaagacggtggacatccctctcaggagtcaactatc
ctcataaaagattgtagtttaatgtcacaaggcgtccctatccatcaacgtttttctgac
gatgaagagagagagacagaagagacggttgcttcataa
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