Xiphophorus couchianus (Monterrey platyfish): 114154977
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Entry
114154977 CDS
T05908
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114154977 (tfip11)
Spliceosome [BR:
xco03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114154977 (tfip11)
Other components
Complex C specific factors
114154977 (tfip11)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
PGA_cap
Motif
Other DBs
NCBI-GeneID:
114154977
NCBI-ProteinID:
XP_027890331
UniProt:
A0A3B5MGE9
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Position
12:17842459..17849294
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AA seq
829 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEIESFEVTDWDLANEFNPERRRFRQTKEQATYGIWADRDSDED
ERPSFGGKRSKDYTTPVSFVSAGVRKTAAEEKQQQQGGSDDSDDDSPPAPPPPRATAPKK
LQMGTFGGNQAQRFAGGIQSGKGIGNWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGIVNP
IEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFKKELGQWRKDPAGTVGKKKP
KYSYKTADELKAKGKMAYRGTPASAGELAQVKVIDMTGREQKVYYSYSQISNKHSVPDEA
PPSLATRDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRALQS
RLDTEQDAIKRMETVLALVERFPTEETAPGEGPTLQECARMFETLQTDYYEEYKTMGLGD
LAVAVVHPLLKEKLSSWDPLKDSSYCLEDIGQWRAILESQDMHSSGPHSNMDPYHRLLWE
VWIPVMRSCVSNWQPRLVGPMVDCLDLWAPLLPPWILDQLLEQMILPRLQREVDNWNPLT
DTVPIHSWIHPWLPLLQARLEPLYPPIRSKLSNALQRWHPSDASARLILQPWKNVFTAGA
WEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFPKWL
QVLCSWLSNSPNYEEITKWYLGWKSMYSDVLLAQPLIKEKFNEALDIMNRAVSSGGYMQP
GARENIAYLTQTERRKDFQYEALQERRDAESVAHRGISTGVPTNFKDLIQTKAEENNIVF
MPLVGKRHEGKQLYTFGRIVIFIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtctcacctttacgggcggagggaggaggaggaggaaggtgtggagatagag
agctttgaggtgacagactgggatctggccaatgagttcaacccggagcgtcgcaggttc
agacagaccaaggagcaggccacctatgggatctgggctgacagggattcagatgaggat
gagagacctagcttcggtggcaagaggtctaaagactacactactccagtgagctttgtg
agtgctggtgtgcgtaagactgcagctgaggagaaacagcagcaacaaggaggttctgat
gactctgatgatgattcccctccagcaccacctcctccacgtgcgacggctcccaaaaaa
cttcagatgggtacttttggtgggaatcaggcccagaggtttgcaggtggcatacagtct
ggtaaaggcattggaaactgggagaagcacaccaagggaattggacagaagcttctgcag
aaaatgggttaccagccaggaaaaggtttgggcaagaatgcgcaaggtatcgtgaatccc
attgaggccaaagttcgtaaaggtaaaggagcagtcggtgcttatggcaatgagcgaact
cagcagagtcttcaggacttccccgtggttgactctgaggaagaggaggaaaaggaattt
aagaaagagttaggccagtggcgtaaggatccggctgggaccgtgggaaagaagaaacca
aagtactcctacaaaactgcagatgagctaaaagctaaaggtaaaatggcttatcggggc
acaccggcatctgcaggagagctggcacaagtcaaggtcatagatatgactggccgagag
cagaaggtttactacagctacagccagatatccaacaaacacagcgttccagatgaagcc
ccaccaagtctggccacccgcgatcagaaaggatctggctttgctctccctgagcttgag
cacaacctgcagcttctaatagacctcacagagcaggacattttacagtccgccaggcgt
ttgcagcatgaaaaagacgtggttgtttctctgagccacgaatctcgagccttgcagagc
cgactggacacagagcaggatgccattaaaagaatggagactgtgttggccttggtggag
cgatttcctacggaggagacggcgccgggcgaggggccaaccctgcaggagtgtgcccgt
atgtttgagaccctgcagactgattattatgaagagtacaagacaatgggactgggggac
ctggctgtcgctgttgtacacccgttactcaaagagaaactctcctcctgggaccctctc
aaggacagctcatactgtctggaagatattggtcaatggagagcaatcctcgagtcccaa
gacatgcactccagcggtccacattcaaacatggatccataccacagactgttatgggag
gtgtggatcccagtgatgcgctcctgtgtgtccaactggcagcctcgactagttgggcca
atggtggactgtttggatttgtgggcccctcttctccccccgtggatcctggatcagctg
ctggagcagatgatcttaccccgactgcagcgagaggtggataactggaaccctttgacc
gacaccgtcccgattcactcctggatccacccttggctgcctctgctccaagcccgcctg
gagcctctttaccctcctatcaggagcaaactgtccaacgctttgcaacggtggcatcca
agtgacgcctcagcccgccttatcctgcagccatggaagaatgtgttcacagcaggagca
tgggaggcctttatggtgaaaaacatcatccctaaactagccttgtgtctggaagagctg
gttatcaaccctcaccagcagcagatggagccatttcactgggtgatggactgggaaggc
atgctgtccccctccagcctggtctcgcttttggataaaaacttttttcccaaatggttg
caggtgctgtgttcgtggctgagcaacagtccaaactatgaggaaattactaagtggtac
ctcggctggaaaagcatgtacagcgacgtcttgttggcgcagccactaattaaagagaaa
ttcaacgaagctttggacatcatgaaccgagcagtgtcttcagggggatacatgcaacca
ggagcaagagagaacattgcatatctcacacagacagaaagacggaaggacttccaatac
gaagcgctgcaggagcgcagggatgctgagagtgtggctcatagaggcatcagtactggt
gtgccaacaaactttaaagatctcattcagaccaaagcagaggagaacaacatcgtcttc
atgcccttagtgggcaaacggcacgaggggaagcagctctacacatttggacgtattgtg
atcttcatagacaggggggttgtgttcgtgcaaggggagaagacttgggttcccacgtct
ttgcagagtctcatagatatggcaaagtga
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