Xiphophorus couchianus (Monterrey platyfish): 114154982
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Entry
114154982 CDS
T05908
Name
(RefSeq) homer protein homolog 1-like isoform X1
KO
K15010
homer
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
114154982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114154982
Cilium and associated proteins [BR:
xco03037
]
Other cilia and associated proteins
Stereociliary proteins
114154982
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
GAS
DUF6909
DASH_Duo1
Nuf2_DHR10-like
BLOC1_2
DnaX_C
DUF3829
DUF3450
PKcGMP_CC
Terminase_3C
DUF2937
Motif
Other DBs
NCBI-GeneID:
114154982
NCBI-ProteinID:
XP_027890340
UniProt:
A0A3B5MFL1
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Position
12:18277811..18311470
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AA seq
402 aa
AA seq
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MEDGELVIRLPGRSDSPLGSRGSGGVGETLVLRHKEVHHFFFVPFREQPIYSTRAHVFQI
DPNTKKNWLPASKHAVTVSYFYDSTRNVYRIISLDGTKAIINSTISPNMTFTKTSQKFGQ
WADSRANTVYGLGFSTEHHLSKFAEKFAEYKEAARLAKEKSQEKMEMATSPSQESPAGEL
ASPLTPLTPPMENINGTDEICDTTPNSDSRPEPAQNALAFAHSPAMTKHWEAELEALKGN
NAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECQSNQTPVIKSQKTELNQTI
EELENVLRDKEEEMEKLKEELENTNDLMEQKDTLTQKLEETELRSRVLEEQLAGAEQRLE
ENQEEQESFRKSLRTLLELLDGKIFELTELRDTLARLIEEAS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcgagctggtgatcaggctccctggtcgatccgactccccactgggcagc
aggggttctggtggtgtaggcgagaccctggtgctgaggcacaaagaggttcaccacttc
ttctttgtccccttcagggagcagcccatctacagcacgagggcccacgtcttccagatt
gaccccaacaccaagaagaactggctccccgcaagcaagcacgccgtcactgtgtcctac
ttctacgacagcacgcgcaatgtctaccggatcatcagcctggacggaaccaaggcaata
atcaacagcaccatcagtccgaacatgacgttcacaaagacgtcacagaagtttggccag
tgggcggacagtcgagcgaacactgtctacggactgggtttctccaccgagcatcatctg
tcaaagtttgcagagaagtttgcagagtacaaagaagcagcgcggcttgctaaggagaag
agccaggagaagatggagatggccacgtctccctctcaagagtctccggccggtgagctc
gcctcccccctcacccctttgactccccccatggaaaacatcaacggcacggatgagatc
tgcgacacgactcccaactcggacagccgtccggagccggcacagaacgctctggctttc
gcacacagcccggccatgacaaaacactgggaggctgagctggaggcgctaaaggggaac
aacgccaagctgacggcggctctgctggaatccacggccaacgtcaaacagtggaaacag
caactggctgcctaccaagaggaggcagagagactacacaaacgggtgacagagcttgag
tgccagagtaaccaaaccccggtgatcaaatcccaaaagacagaactcaaccaaaccata
gaggagctggagaatgtgctgcgggataaagaagaggaaatggagaagttaaaagaagaa
ctggaaaacacgaatgacctcatggagcagaaagacactctgactcagaagcttgaagag
acggagctgcgcagtcgggtgctggaggagcagctagcaggagctgagcaacgactggag
gagaaccaagaagagcaggagagtttcaggaagagcctgcggacgctgctggagctgcta
gacggcaagatctttgagctgacggagctcagagacaccttggctcgtctcatagaggaa
gccagctag
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