Xiphophorus couchianus (Monterrey platyfish): 114154992
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Entry
114154992 CDS
T05908
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114154992 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114154992 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114154992 (usp30)
04121 Ubiquitin system [BR:
xco04121
]
114154992 (usp30)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114154992 (usp30)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114154992 (usp30)
Membrane trafficking [BR:
xco04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
114154992 (usp30)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114154992 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
114154992
NCBI-ProteinID:
XP_027890361
LinkDB
All DBs
Position
12:17149523..17157522
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AA seq
506 aa
AA seq
DB search
MDNRMLWCRPESWDKLVGEFLGTGPTIRNKMLKNWGLVGGIAAAIAAGAYVLWGPITERK
KRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFVKWLERFSGLPSIQSCKDNQLSFTLLQL
LQALSSEEPGDEEVLDAGCLLDVLSLYRWHISSFEEQDAHELFHVLTSSLEEERNRQPKV
THLFDMQSLESLPDEEDKTVACISRAPLHPIPGLWKFQHPFHGRLTSNMSCKHCEIQSPV
RYDSFESLSLSIPLPQWGRPLSLDQCLQHFISSETIKEVECENCTKLQQSSTRNGQVFES
QRTTFVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEYLSMDRYKHNSSTQRS
QRFTSTPIAIKTESLEDSTERLKANGTGAEHHNNNKPFSNGTCSSVFLLSPGLNPQLGLT
YDFSSAEYLFQLTAVLVHHGDMHSGHFVTYRRSPPSPCSASPFSCQWLWVSDDSVRKASL
QEVLSSNAYMLFYERVRLPTIDRVVA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacaacagaatgttgtggtgcagaccagaaagctgggataagcttgtgggggagttt
cttggcacaggacccacaatcaggaacaagatgctaaaaaactggggtctcgtcggaggg
atcgcggctgctattgcagctggagcatacgtcctgtggggcccgatcactgagaggaag
aaaaggaagagaggaatggtcccaggtctgctgaacttgggcaacacctgcttcctgaac
tccttgcttcagggtttggcagcatgtccgtctttcgtcaaatggctggagaggttttca
ggcctgccctcgatccagtcatgtaaagacaaccagctgtccttcacgctgctgcaacta
ctccaagctctgtccagtgaggagcctggagacgaggaggttttagatgctggatgcctc
ctggatgttctcagtctgtatcgctggcacatcagctcatttgaagagcaggatgcacac
gaactttttcacgtcctcacgtcttctctagaggaggagcgaaatcgacaacctaaagtc
acacatttgtttgacatgcagtccctggagtctcttcctgatgaagaggacaaaactgtg
gcctgcattagtcgagctcctcttcatccgataccaggtctctggaagttccagcatcct
tttcatggtcgtctaacgagcaatatgtcgtgcaagcactgtgaaattcaaagtccagta
cggtacgactcatttgagagcctctctttgtccatccctcttcctcagtggggtcggcct
ctctctctagatcagtgtctgcagcatttcatttcgtcagagacaatcaaagaggtggag
tgtgaaaactgcacaaagcttcaacaaagctcgacaagaaatgggcaagtttttgaaagc
cagaggacaacgtttgttaaacagcttaaacttggaaagctccctcagtgcctctgcatc
cacctacaaagactgacgtggtccagtgaaggaacgcccatcaagcgacaggagcacgtc
cagttcacggagtatctatcaatggatcgctacaaacacaacagctccacacagaggagt
cagcggttcacatcgactccgatagccataaaaacagaaagtttggaggattccacagaa
aggctaaaagctaatgggacaggtgcagaacatcataacaacaacaagcctttctctaat
ggaacctgttcttctgtatttcttctctctcctggtttgaacccacagctcggtctcacg
tatgacttcagctccgcagagtatttattccagctaacagcggtgttggttcaccacggt
gacatgcactctggacattttgtcacctaccgccgcagccctccctcgccctgcagcgcc
tcacccttcagctgtcagtggctctgggtgtctgacgactctgtgcggaaagccagcctg
caggaggtgctgtcttccaacgcgtacatgctcttctacgagagagtacgactgccgacg
atcgatcgagtagtcgcctga
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