Xiphophorus couchianus (Monterrey platyfish): 114155014
Help
Entry
114155014 CDS
T05908
Symbol
smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114155014 (smarcad1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114155014 (smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HHH_3
UBA_8
UBA_N4BP1_C
T2SSK
TAP_C
HHH_5
UBA_4
Motif
Other DBs
NCBI-GeneID:
114155014
NCBI-ProteinID:
XP_027890403
LinkDB
All DBs
Position
12:11380673..11392640
Genome browser
AA seq
1093 aa
AA seq
DB search
MSMFNLDRFRFEKKGANKDPGCVSKSPDSEKENEPAQMKSFKAMPKSHARGVIFEEVISI
DLEEDDVMAEPNTKIQITTKNKDVSDSRCSVQKLPKNLAPLNTDDEDEEMDEKISKLLEL
FPQLSRTEVIEVSGSTSTLEGAIAVCLLKFGDEEAPNDGKKRKQDGSSCSQDSGDIQPSK
RRKPSLVSDEEREGDEPSWEKQEAMVRKLQKRFPDQDKEELRMVLQEHNWDVEEALQVLQ
MFSESDNSSTSLVIPKEQKSKGKAESTSNYSEDNSETNGMSTDDTENSSTDSDKSEKTKP
KRKQMSIRDYKDSKGQKSTERKREAHHGDPEDHRDVDKADGNSTDNTKDSEDESELEDTK
VSKLSTNIHTVHSRITFLSFSRMQTSTSSTSKPSPSSSASQVLSSDARLAKKQAAERKKK
ARATEEQVSSDEEEDVVTSEFEDSDDELESINVKKDVKDEILAFFQDASIDELSLISGCS
VKKAQRIVELRPFDSWESLWDVFHKGNGLSDDLMHGCKVVLKERKVILGLMSKCQTISTK
MVQRVTEVMESGTGSTKQPSLLNSQLQLKPYQLIGLKWLMLLNEHKLSGILADEMGLGKT
IQAIAFLAQLYENGIEGPHLITVPSSTLDNWVRELRLWCPAVEVLIYYGSVEERRYLKHD
ILNGEVHFNVIVTTYNLAIGNDSDRSLFRKLPIKYAIFDEGHMLKNMNTLRYRHLMAINA
EHRLLLTGTPLQNNLLELMSLLNFIMPTMFSNSTMQLSKMFSMKSHEEQSRFERDRITRA
KLIMKPFILRRVKNEVLKQLPAKEEKIEFCSMSEKQQVLYEALLKKLKSTTIGEKRELCN
VMMQLRKMANHPLLHRQYYTTEKLQAMSQLMLKEPTHHDASAALIQEDMEVMSDFELHRL
CQQYFSIGSFQLDTSLLLDSGKFLHLKELLASLKSQGDRVVLFSQFTMMLDIVEVLLKHL
QHRYIRLDGSTPIADRIVLIDEYNTDPDIFVFLLSTRAGGLGINLTSANVVILHDIDYNP
YNDKQAEDRCHRVGQTRTVQVIKLISKDSIEDCILQLGQKKLKLEQDMTAADQDDEGSIP
DDMASLLKASLGL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttcaatctagaccgctttcgattcgagaagaagggagcaaacaaagatcca
ggttgcgtgtccaaaagtccggattctgaaaaggagaacgagccagctcaaatgaaatca
tttaaagccatgccaaagtcccacgcacgaggtgtgatttttgaagaagtcatttccata
gatttggaggaagatgatgtcatggccgagccaaacacaaaaatacaaataaccacaaag
aacaaagatgtttccgattctagatgctcagttcagaagctaccaaaaaatttagcacca
ctaaatacagatgatgaggatgaggagatggatgagaagataagcaaactattggaattg
tttcctcaattatcaagaactgaagtgatagaggtctctgggagtacgagcacgttggag
ggcgctatagctgtctgccttttaaaatttggggatgaagaagctccaaatgatggcaag
aagagaaagcaggatggatccagctgttctcaggacagtggtgatattcaacccagtaaa
agacggaaaccgtctttggtctctgatgaagagcgcgaaggggatgaaccaagctgggaa
aagcaggaggccatggtgagaaaactccagaaacggtttccggaccaggacaaggaggag
ttgaggatggtgcttcaggagcacaactgggatgtggaagaagctctgcaggttcttcag
atgttctcagaatcagataatagtagcacaagcctggttattccaaaagagcagaaatca
aagggcaaagctgaatcaaccagtaactactcagaggacaacagtgaaacaaatgggatg
agtactgatgacacagaaaacagttctactgactctgataaatcagaaaaaacaaaacca
aaaaggaaacaaatgtcaattagagattacaaagactcaaagggtcagaagtctactgaa
agaaaaagagaagcacatcatggggatcctgaagaccacagagacgttgataaagcagat
gggaacagtacagataatacaaaggacagtgaagacgagtcggagctggaggacacaaaa
gtctccaaacttagtactaacattcatactgttcactcacggattacgtttttatcattc
tctcgtatgcaaacctctacctcatccacctcgaagccttcgccttcttcctcagcctcc
caggttttgtccagcgacgcgagactcgcaaagaagcaggcggcggagagaaagaagaag
gcacgagctactgaagaacaagtcagttctgatgaggaagaggacgtagtaacaagcgag
tttgaggactctgacgacgagctggagagcatcaatgtcaagaaggatgtgaaagatgaa
atacttgcgtttttccaggatgcatcaatagacgaactgtccctgatttctggctgttct
gttaaaaaggcccagaggattgtggaactgagaccctttgatagctgggaatccctgtgg
gatgtcttccacaagggaaacggactctcagacgatttgatgcatggctgcaaggttgtc
ctcaaagagaggaaggttatccttggactcatgtctaaatgtcaaacaatttctacaaaa
atggtgcaacgggtcacagaggtgatggagagtgggactggctccacaaaacagcccagt
ttacttaacagccagttgcagctcaaaccgtatcagctgattggcctaaagtggcttatg
cttctgaatgaacacaaactgagtggcatccttgctgatgaaatgggtttggggaaaacc
atccaggctatagcatttcttgctcagctgtatgagaacggaatagaaggtcctcatctc
atcactgtgccttcctccacactggataactgggttagagagctgaggctgtggtgccct
gctgttgaagttcttatttattatggatctgtggaagagcgacgctacctcaaacatgac
atcctcaacggggaagtccattttaacgtgattgtgacgacgtataacttggcaataggg
aacgacagcgatcgatctctttttcgtaagctgcctatcaaatatgccatctttgatgaa
ggccacatgttaaagaacatgaacactctgcgctaccgccacctaatggccattaatgct
gagcatcgcctcctgctgacaggaactcctttacaaaacaacctgttagagctgatgtcg
ctgttgaatttcataatgcctaccatgttctccaactccacaatgcagctctccaagatg
ttttctatgaaatctcacgaggaacaaagtcgatttgagagggatcgaattactcgagcc
aaactcatcatgaaaccctttatcttgcgacgagtcaaaaatgaggttctcaagcagctc
ccggccaaagaagaaaagatcgagttctgctccatgagtgagaaacagcaggttctctac
gaagcgctgctaaagaaactaaagagtaccactattggagagaagcgtgagctgtgcaat
gtgatgatgcaactgaggaagatggccaaccatcctcttcttcacagacagtactacacc
acagaaaagcttcaggctatgagccaacttatgctaaaggagccaacccaccacgatgcc
agtgctgctctgattcaggaagacatggaggtgatgtcagattttgagctccatcgtctg
tgtcagcagtatttctccatcggctccttccagctcgacacaagtctccttctcgactct
gggaaattcctccacctaaaagagctgctggcctctctaaaaagccagggagacagagtg
gtgctattcagtcagtttaccatgatgctggacattgtggaagttctcctgaaacatcta
caacatcgttacatcagactggatggatccactcctatcgctgacaggattgttttgatt
gatgagtacaacacagacccagacatattcgtgttcctgttatcgacacgtgctggaggg
ctcggcatcaacctcacctctgctaacgttgtcatcctgcacgatatcgactacaatccc
tacaacgacaaacaggcagaggatagatgtcaccgtgtgggccagaccaggactgtacag
gtgataaagttgatcagtaaggacagcatagaggactgcatcctgcagctcggtcagaag
aagctaaagttggaacaggacatgactgctgctgaccaagatgatgaaggaagcattcct
gacgatatggcctctttactcaaagcctctctgggactgtga
DBGET
integrated database retrieval system
