Xiphophorus couchianus (Monterrey platyfish): 114155115
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Entry
114155115 CDS
T05908
Symbol
lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114155115 (lgi3)
Membrane trafficking [BR:
xco04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
114155115 (lgi3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
LRR_14
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-GeneID:
114155115
NCBI-ProteinID:
XP_027890626
LinkDB
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Position
12:complement(25498362..25506372)
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AA seq
635 aa
AA seq
DB search
MQKQNQGKLQRTHTHRGDTEVPFLFLSFSSPASPLSLSVSLRSVFTELHTDRQAGRQLGR
RCVCVCVASPPTSRSSRTQPPIPSAGMLLELGSRWLRLMFVSVVCLCLCLPGESYTKKAP
KVPRCPATCSCTKDSAFCVDTKAIPKSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLL
LNSNTFTMIADDAFAGLSHLQYLFIENNDIQDLSKYTFRGLKSLTHLSLSNNNLQQLPRD
LFKHLDILTDLDLRGNSFRCDCKIKWLVDWMEKTNTSVPAIYCASPFEFQGRRIRDLTPR
DFNCITADFAVYETFPFHSVSAESYEFSGDQFVAFAQPDSGFCTLYIWDHVEMIFRRFHN
ITSRSAVYCKPVVINNTLYMVVAQLFGGSHIYKWEEGPQRFIKIQDIDTNRVRKPNFVDT
FLLDDEWYFVVADSSKAGSTSIYRWNSNGFYSHQSLHPWHRDTHVEFIDVGGKPHLILSS
ASQPPVVYQWNRNQKQFAFHSIITELADVQMVKHFWVRKVLYLCLTRFIGDSKILRWEGQ
RFVEIQTLPSRGSMAVYPFTVGPRQYLILGSDFSFSRVYLWDDLTQRFQPFQELNMRAPR
GFSLVSVDKKDILLAASFKGNTLAYQHLVVDLSAK
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcagaaccaggggaagctgcagcgcacccacacccaccgaggagatacagaa
gtacccttcctcttcctctccttctcctcccccgcctcccctctctccctctccgtctct
ctgcgctcagttttcacagaactgcacacagacagacaggcaggcagacagctaggcagg
cgctgtgtgtgtgtgtgtgtcgcctctccaccgacttcaagaagctcacgcacccagcct
cctatacccagcgccgggatgctgctggagctcggctcgagatggctgaggctgatgttc
gtgtcggtggtgtgtctgtgcctctgcctgccgggggaatcgtacaccaagaaagccccg
aaggtgcctcgctgccctgcgacctgctcctgcaccaaagacagcgccttctgcgtggac
accaaggccattcccaagagcttcccccctggaatcatctctctgacgatggtgaacgcg
gccttcacgacgatcccagagggagctttctcgcaccttcatctgctgcagttcctgctc
ttgaactccaacaccttcaccatgattgccgacgatgcttttgctggtctgtcccacctg
cagtatttattcattgagaataatgatatccaggacctgtccaagtataccttcagagga
ctcaagtctctcactcatctatccctctcaaacaacaacctgcagcagctgcccagagat
ctcttcaaacatctagacatcctcacagatttagacctgcgtgggaactcgttccgctgc
gactgtaagatcaagtggctggtcgactggatggagaagaccaacacttcagttccggcc
atctactgcgccagcccctttgagtttcagggtcgcagaatccgagatctcactccacga
gatttcaactgcattacagcagacttcgctgtgtatgaaaccttccctttccactcagtg
tcagcggagtcctatgagttcagtggagatcagtttgtggcctttgctcagcccgattct
ggattctgtaccctgtacatatgggatcatgtggagatgatcttcagaagatttcacaac
atcacttctcgctcggctgtgtactgcaaacctgttgtgataaacaacactctttacatg
gttgtggctcaactttttggtggatcccacatatacaagtgggaggagggaccgcagcgc
tttataaagatccaagacatcgacaccaaccgggtgaggaaaccaaactttgtggacacc
ttcctgctggacgatgagtggtattttgttgtggcggacagctccaaggcaggctccacc
agtatctatcgctggaacagcaatgggttctactcccatcagtccctccatccttggcac
cgggacactcacgtggagttcatagacgttggcgggaagcctcaccttatcctgtccagc
gcctcccagcctcccgtggtctaccagtggaaccggaaccagaagcagttcgctttccat
tccataatcacggagcttgcagatgtgcagatggtcaagcacttctgggtgaggaaggtc
ctctacctctgcctcacgcgcttcattggcgactccaagatcctgcgctgggaggggcag
cgctttgtggagatccagactctgccctctcgggggtcgatggcggtgtatcccttcacg
gtggggcctcgccagtacctcatcctgggcagtgacttctccttctccagagtgtacctg
tgggacgacctcacccagcgcttccagcccttccaggagctcaacatgagggctccgagg
gggttcagcctggtgtccgtcgacaaaaaggacattctactggctgccagcttcaaaggc
aacaccctggcctaccagcacctggtggtggatctcagtgccaaatga
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