Xiphophorus couchianus (Monterrey platyfish): 114155191
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Entry
114155191 CDS
T05908
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114155191 (zfr)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114155191 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
114155191
NCBI-ProteinID:
XP_027890775
LinkDB
All DBs
Position
12:complement(779950..825833)
Genome browser
AA seq
1069 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAAAVAVARPAPVAVAAATAAAYGGYQPTHTTNDYGYPQRQAEV
PPPPPPVTSQNYQDSYSYVRSTASAVAYDSKQYYQQPSVTAAVAAAQPQPSVADSYYQTA
PKAVYSQGVTSYTQSQQNRQVTVIKPAAASPASSTFSIFPVTSTVQPVAAAAAAASVVPS
YSQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWSGNTFPK
KPTFQSKQLRPKQPPKPTQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQGSSS
STAGGALARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSM
ITQTSASGASATGKTSLSSSSTSSSLCLSSNSSSSSSAPYLKAVNIASSSVVIKNPLASN
LSVASSAAPGKKVNTPKINFVAGSKLQTTGKMEEMREEIKGDTCKPSAPSSASPDAKADL
CDSLSTSALIALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKGRR
HRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYEED
MYWRRMEEEQHHWDDRRRMPDGGYIQGPLGPPGLLGVRPGLPGLQPQGPMPPRRPDSSDD
RYIMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQEHDKEDDKEKKEPAKDRVL
KGVMRVGVLAKGLLLRGDKNVNLVLLCSDKPTESLLACIVEHLPKQLTLVSPDKYEVKGS
MEEAAIILTSCIEPKMQVTITLTSPVIREEPGREGDVTSGMVKDPADVLDRQKCLDALAA
LRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAINSASAPLSPG
DALRRVFECISSGILLPGGPGLLDPCEKKPVDTLTAMGEQQREDITSSAQFALRLLAFRQ
IHKVLGMDPLPQMNPRFNVRNSRKRRHDNSDGTDSFEGEGKKDKKDFDN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatatgtccagtggtctccttcacctatgtgcccagccggcttggtgaagat
gccaaaatggctaccggcaattatttcggatttacgcatggcgccgcagctcagtacagc
cagcagccagctgcaggggtagcatacactcatcccaccactgtggccagttacacagtt
catcaggcaccggtggcagcacacactgttgcagcagcctatgcacccactgcagctgcc
gttgctgtggcaagacctgcgcctgttgccgtggcagctgcaactgctgccgcttatgga
ggataccagccaacccatactaccaatgattatggctacccacaacgccaagcggaggtc
ccgccaccccctccaccagtcacctcacagaattaccaggactcttactcatatgttcgc
tccacggcttcagctgtagcttatgacagtaagcagtactaccagcagccttctgtcaca
gcagctgttgctgctgcacagccgcagcccagtgttgcagactcttactatcagacagct
cccaaagctgtatatagtcaaggtgtaacatcctatacccagagccaacagaatcgccag
gttactgtcatcaagccagctgctgccagtccagcttcatccaccttctccatcttcccg
gtgacctccactgttcagccagtggcagctgcagcggctgcagcctcagttgttccttct
tactcccaaagcccaacatacagcaccaatgctgtcacctactctggaacatcgtactcg
ggctatgaagcagctgtgtactcagcggcctccagctactaccagcagcagcagcagcag
aagcaggcagttgcagcagtggcagcaacagctgcctggtcaggaaacactttccctaag
aaacccacattccagagtaagcagcttcgacccaagcagccacccaagcccactcagata
cactactgtgatgtctgcaagatcagctgtgctggcccacagacttataaagagcatttg
gaaggccagaagcataagaagaaagaagcagcactgaaagtgtcgcagggcagcagcagc
agcactgcaggaggagcgctggcccggaacgctcagaaccagcttcgctgtgaactttgt
gatgtttcgtgcactggagctgatgcttatgccgcccatattcgaggagccaagcaccag
aaggttgtgaaacttcataccaaacttggaaagcccattccttccacagagcccagtatg
atcactcagacatcagcctcaggtgcttctgctactggcaagacctcccttagcagttcc
agcacttccagctctttgtgtctgtcttccaactcttcctccagctctagcgccccctat
ctgaaagctgtcaacatagccagcagcagtgtggttatcaagaatccactggccagcaat
ctctctgttgccagttctgcagcacctggcaagaaagtcaacactccgaagattaatttt
gttgctggaagtaaattacagacgacaggaaagatggaggagatgagagaagaaatcaaa
ggcgatacttgtaagccgtccgcaccctcttctgcttccccagatgctaaggctgatctc
tgtgattctctgtccacatcggcacttattgctttgcagagtgacgtccagcctgttggt
catgactatgtggaagaagtcagaaatgatgaaggcaaagtcattcgttttcactgcaag
ctgtgtgaatgtagcttcaacgatcccaacgcaaaggaaatgcacctgaagggacggagg
catcgcctccagtataagaagaaggtaaatcctgatctgcaggtagaggtcaagcccagc
attcgagcccgaaagattcaggaagaaaagatgagaaaacagatgcagaaagaagagtac
tggagaagaagagaagaggaggagcgctggaggatggaaatgaggcgatatgaagaggac
atgtactggagacgtatggaggaggagcagcatcactgggatgatcggcgtcgaatgcct
gatggggggtacatacaggggcccctgggccctcctggccttctaggagtccgaccaggt
ctgccaggtctgcagccacagggtcccatgccgccccgtcgtccagattcttctgatgac
cgctacatcatgaccaagcatgcagccatttacccatctgaagatgagctccagtccatt
cagaaaattgtgtcaattacagagcgagccctcaaacttgtctctgacataatcacagat
caggaacacgacaaagaggacgataaagagaagaaggaaccggccaaagacagagtgcta
aagggtgtgatgagggttggtgtcctagctaaaggcctgctgctccgtggagacaagaat
gtcaacctagtgctgctctgctctgacaagcccacagaaagcctgctggcctgcattgtg
gagcacctccccaaacagctaacgctagtatcaccagacaaatatgaggtcaagggatcg
atggaggaagcggctatcatcctaacatcttgcattgagccgaagatgcaagtgacaatc
actttaacttcaccggtcatcagagaggagccaggccgggaaggagatgtaacctcgggt
atggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctggctgct
ctgcgccacgctaagtggttccaggctagagccaatggtcttcagtcctgcgtgatcatc
atccggatcctgagagacctctgtcagcgagtccccacatggtcacctttcccaggatgg
gcaatggagctgctggttgagaaggccattaacagcgcctcggcccctctcagccccggt
gatgcactgagacgtgtctttgaatgcatttcttctggaattttacttcctggtggacca
gggttattggatccatgtgagaagaagcctgtggataccctcactgccatgggagagcag
cagagagaggacataacctccagcgctcagtttgctctgaggcttctggcgttccgtcaa
attcacaaagttctgggtatggatcccttgccgcagatgaaccctcgcttcaatgttcgc
aacagccggaaacgccgtcatgacaacagtgatggaacagacagctttgaaggggaaggc
aaaaaagacaaaaaagattttgataattaa
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