Xiphophorus couchianus (Monterrey platyfish): 114155302
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Entry
114155302 CDS
T05908
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114155302 (trim71)
04121 Ubiquitin system [BR:
xco04121
]
114155302 (trim71)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114155302 (trim71)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114155302 (trim71)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114155302 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
114155302
NCBI-ProteinID:
XP_027890924
UniProt:
A0A3B5KQT3
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All DBs
Position
13:5437774..5479711
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AA seq
831 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSGSSNHATKRLHVLPCLHTFCR
QCLEGQRSPSDPLKLRCPTCDHKVSISEAGVDSLPSSNFLFSNLLDVVVSSEDQIQNKNG
HHHLGGLIGGSSGFHPSHGGLLHAQHMGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
QRVRLTKDHFIERLGESLHLSRVNSNSSGTGQPGVSVSLAQSLQNNFALLSLFQDRMSFC
QHHDSEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAQQGRQA
VQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHRKALEERECELLWKVEKIRQVKAKSLY
LQVEKLHQSLTKLDSTIAAVSQILDEGHHLDVLLARERMLTQIHELKTLRGLLQPQEDDR
FMFTPPDQALYIAIQSMGLISSSAFAPVTKAHGEGLKNVLRGKPASFTVIGYNHDGEPRL
SGSDPVSVMVMSVADGSPSAVEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHIQGSPFK
VIVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKPCG
AFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKN
GQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNH
EDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHR
IQVFEPNGNFLCKFGTQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttccccgattctgacctgcagacctgtccgctctgcaaggagctgtgcggc
tcctccgctcccatctcctccagctcttctacctcgtcctcctcttcgcacacctctggc
tcctctaaccacgccaccaagaggctccacgtcctaccctgcctgcacaccttctgcagg
cagtgtttggagggacagcgcagccccagcgacccgctgaagctgcgttgccccacctgc
gaccacaaggtctccatctctgaggccggagtggactccctgccttcctccaacttcctc
ttcagcaacctgttggacgtggtggtgagctcggaagatcagatccagaataagaacggt
caccatcacctcgggggcctgatcgggggctcgtccgggttccacccgtcacacgggggc
ctgctgcacgcgcagcacatgggggagcctcagtgcagctcctgcgacgaggagaacccg
gccacgtcccactgcctcgactgccaggagtacctctgtgacaactgcgtgcgagctcac
cagcgggtgcggctcaccaaagaccacttcatcgagcgcctgggggagagcctccacctg
agccgggtcaactccaacagcagcggcacgggccagccaggggtgtccgtgtccctcgcc
cagtccttgcagaacaacttcgcgctgctgtccctgttccaggaccggatgagcttctgc
cagcaccatgacagcgaggtgttcctgttcttctgcgaaacctgctcggtgccgatctgc
agggagtgcagcgtgggccgtcacatgggccacaccttcgtctacctgcaggacgccgtg
caggactgcagggccatcaccatccagctgctggctgacgctcagcagggtcgacaggct
gtccagctaagcatggaaaaagtccaagccatggcggagcaggtggagatcaaggcgaag
gtggtgcagaccgaagtgaaggctctcgttctgagacacaggaaagccctggaggagagg
gagtgtgagctcctgtggaaggtggagaagatccgtcaggtgaaggccaagtctctgtac
ctgcaggtggagaaactccaccagagtctgaccaagctggatagcaccattgctgctgtg
agccagatactggatgagggccaccacctggacgtgctgctggccagggagagaatgctg
acccagatccatgaactcaagactctcagggggctgctgcagccgcaagaggacgaccgc
ttcatgttcacgcctccagaccaggctctgtacatcgccatccagtccatgggcctgatc
agcagcagcgcctttgcccccgtcaccaaagcccacggcgaaggtctgaaaaacgtattg
cgcgggaagcccgcgtccttcaccgtcatcggatacaatcacgacggcgagccgcgtttg
tccggcagcgacccggtgtcggtgatggtgatgtccgtcgcagacggctctccgtccgcg
gtggaggtgacggatcaccagaacggatcctacaccgtcagctacctgccgaaaacggag
ggggaacacctggtgtctgtgttggtgtgcaaccagcacatccagggcagccccttcaag
gtgatagtcaagtccggacggagctacgggtccctcggctcccaggtgtcgtctttcgga
tgtgagggggagggagacggccagctgtgtcgcccctggggcatcagcgtggacaaggaa
ggatatgtcgtggtggcggatcgcagcaacaaccgcatacagatcttcaagccttgcggt
gccttccaccataaattcggctccttgggttctcggcctggtcagtttgatcgtccagcc
ggggttgcctgtgacagtcagagacggatcattgtggctgataaggacaatcaccgtgtg
caggtgtttacgtttgagggccagttcctgctgaagtttggggaaaagggcaccaagaac
gggcagttcaactatccctgggacgtggccgtcaactctgagggtaaaatcttggtctcg
gacaccagaaaccaccgcgtgcaactctttgcccccgacggttccttcctcaacaagtac
ggcttcgaaggggctctgtggaaacactttgactcccccagaggggtcgcctttaaccac
gaagaccacctcgtcgtgaccgacttcaacaaccaccggctcctggtcatccggccggac
tgccagtcggctcgcttcttgggctcggagggcacggggaacgggcagtttctgcgcccc
cagggcgtcgccgtggaccaagagaaccgcatcatcgtggccgactcccgcaaccacagg
atccaagtgttcgagcccaacggaaactttttatgcaaatttggcactcaggggagtggc
tacggacagatggaccgcccctccggggtggccgtgatgcccgacggagtcatcgtggtc
gttgactttggaaacaaccgcatactcaagttctaa
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