Xiphophorus couchianus (Monterrey platyfish): 114155351
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Entry
114155351 CDS
T05908
Symbol
snx13
Name
(RefSeq) sorting nexin-13
KO
K17925
sorting nexin-13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114155351 (snx13)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
114155351 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
GLE1
DUF6395
Motif
Other DBs
NCBI-GeneID:
114155351
NCBI-ProteinID:
XP_027890998
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All DBs
Position
13:complement(9797503..9820710)
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AA seq
954 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFFVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLE
KCEHSYLPPTQIGIPKTLDDMKLEVKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWY
YTLSEDESFLLEIRQTLQNALIQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
DREDKQRDITDELVDSFFEAEVEMERKICRDVVCTSHRDEEGFLRDLCELLLYLLLPPGD
FHNKSMRYFLREVLAYGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKP
AELEAVKDKVLEELLYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLQSGKEVDAL
KLAASFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEAM
QSWQKDGKKQPGATKGLLKAAALGVYEQYLSDKASPRVQVDKELVTNLGEKLQKEDPTPE
IFDEVQRKVYEMMLRDERFYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPT
GSLNLSLDDLNNSCHDEFLQLHAFISDTGVCNDHGKTYALYAITVIRRNPDGSEDSWKTY
RRYSDFHDFHMRITEQFENLTSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNAELV
KACPTLIPYVYDFLENKAYSKGKGEFARKIDTFVNPLRSSMRNMSNAVKSLPDSLAEGMN
KVSDNMGRMSERLGQDIKQNIFKVPPLLPKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLL
MDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYMTSPEQVAEYVKKFRD
SYWPNGILAETPPRRDKCIRMRTRVAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQ
YQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIQRYSQKLQCSTLKR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtcttggagttgtgctgttc
tttgtaacctttggaccttttgccatattctacctggccttctatatattttgcttcatt
ggaggtggctttgcagtcactttgctttatggaaagataaactcagagaaacacctggaa
aaatgcgaacactcttatttgccacccacacaaattggtatacccaagacactggatgac
atgaaactggaggtaaagccaataaagattgacaggagactgactggatccagtttcatt
gatgagccactacaacaggtgatccagtttgcgctgagagactatatccagtactggtat
tacactctgagtgaagatgagtcctttttgctggagatcagacaaactctacagaatgcc
ctcatccagttctccacgcggtccaaagaggtggactggcagccttacttcaccacccgc
ctggtggacgacttcgccacccatttacgtgtctttagaaaagcccaggatcgcctcgcc
gacagagaggacaagcagagagacataacggatgagctggttgactcattttttgaggct
gaagtggagatggaaagaaaaatttgtagagacgtagtttgcacatcccaccgcgatgaa
gaaggttttcttcgagacttgtgtgagttgcttctgtatttgttactacctcctggagat
ttccacaacaaaagcatgagatacttcctgagggaggtgctagcatacggagtgctactt
cctctgatcaatcaactgagtgacccggactatattaaccagtttgtcatctggatgatt
cgggactcaagctgcaactatgaagccttcatgaacatcttgaagttgacagacaagccg
gccgagctggaagctgttaaagacaaggtgctggaggagctgctgtatctccgctcactg
gacacagctggagatgacatcaatgtgatcaaaaaccagattaacagtcttctgtttgtg
aagaaggtgtgtgagaccaggatccagagactacagtccggaaaggaggtcgatgccttg
aagctggcagccagttttggcaagctgtgcgttatcccactggatcacatcctcgtccac
aacatagcgctgcagttcttcatggacttcatgcaggcagcgggggctcaggcggagctg
ttcttttggctcactgtggagggatacagggtgacggctcagcagcagctggaggcgatg
cagagctggcagaaagatggcaagaagcagccgggggccaccaagggcctgctgaaggcg
gctgcactgggggtctatgagcagtacctttctgacaaggcgtctcccagggtacaggtg
gacaaggagttggtaacaaatctgggagagaagctgcagaaagaagaccccacgcctgaa
atatttgatgaagttcagagaaaagtctatgaaatgatgctacgtgatgagcgcttctac
ccgtccttcaagcagagtcccctgtacgtccgcatgctggcagagctggacatgctgaaa
gagccaagttacagaggatctgatgatggtgatggagagtccttcaacggctcgcctaca
ggaagcctaaacctgtcactggatgacctcaacaactcctgccatgatgaattcctgcag
ctacatgccttcatatctgacacgggggtttgcaacgatcatggtaagacctacgcactt
tacgccatcaccgtgataagacgcaacccagacggcagcgaggactcctggaagacatac
cgccgctactcagacttccatgacttccatatgagaataacagagcagtttgagaacctg
acgtcgatcctcaagcttccaggaaagaaaaccttcaacaatatggacagagacttcttg
gagaagagaaaaaaagacctcaatgcttatcttcagttactgctaaacgcagagctggtg
aaggcctgtccaactttgattccctacgtctatgacttcctagaaaacaaggcctacagc
aagggcaaaggagagtttgcacgaaagatagacacatttgtgaatcctttgcggagctcc
atgaggaacatgtccaatgcagtgaaatccctgccagacagcctggctgagggaatgaat
aaagtctctgacaacatgggccgcatgtcagaaagacttggtcaggacatcaaacagaac
atatttaaggtgcctccacttcttccaaaatctgacatcgacccagaacactgtcgagtc
tctgctcagctggacgacaatgtggacgataacatccctctgcgagtcatgctgctccta
atggacgaggtgtttgatctcaaagagaaaaaccagtggctgcgcaggaacattaagaac
ctgctgcagcagctcatcagagccacttacggcgacacgatcaacaggaaaattgtggat
catgtcgactatatgacctctccagaacaggtggcggaatatgtgaaaaagttcagggat
tcctactggcctaatgggattctagccgagaccccaccgcgccgggacaagtgcatccgc
atgaggacgcgagtcgctgccaagaccagcctgcttggcatcatgccagacgagctgaag
cacatcatcggagcggacaccaccaggaagggcatcctccgcgtcttcgacatgtttcag
taccagcccatgaaccggcgcctagtctacgtgttcctggagggcttcctggagaccatg
ttcccccagtacaaattccccgagctgttcgtcaagctgcactcccgttcgccgcgcatt
caaagatacagccagaaactccagtgctccacgctgaagaggtga
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