Xiphophorus couchianus (Monterrey platyfish): 114155383
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Entry
114155383 CDS
T05908
Name
(RefSeq) POU domain, class 2, transcription factor 2-like
KO
K09364
POU domain transcription factor, class 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114155383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114155383
03021 Transcription machinery [BR:
xco03021
]
114155383
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114155383
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
114155383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
114155383
NCBI-ProteinID:
XP_027891047
LinkDB
All DBs
Position
13:24073820..24139523
Genome browser
AA seq
738 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLVPRSSPDIRMSKAPGEEKPGAEYPGDGSDSDRN
SPDDQLQVQKMRSSPYSLSPTAAGSKVKSEESSEITHSAAAAAAAAPPAAPPSQQQQQQQ
QQAQHHHTQLMLASSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAAHAAAQQ
QANQQQQQPTKQEQPVQAPPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFL
LSQPAQAQQPQQGLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKSSDAGSSSSSSASV
AASGSSSAVTSVGASSASSSAMASSLTSGLNPGGQTAQMSEEPSDLEELEQFARTFKQRR
IKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVD
SMLPSPSSISSPMLGIEGLPGRRRKKRTSIETNVRVVLERNFSTNQKPTSEEILLMAEQL
NMEKEVIRVWFCNRRQKEKRINPSSSSTPPLPSQTSPVVTHKVHCYSPHMISSQSLSQVT
TSLSTTGASSSPSASCPMTPVSSVAMSSSATPPPPHSTASPAPSSLGTAGLATGNTMMGV
STGMNQALIGSNPLATMQALAASGGQLPISSLEGAPGHMFLSGHGGHSVPASLRPSLFLN
RPGLLPMVTCSTPTSSMPMGLVSCGPRPSYCQSSPSGTSNLMSPTSCPEESVSPCSSPAS
FCSFSEASPPPLGGAMAE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggtcccgcggtccagccccgatatcaggatgtccaaagca
ccaggggaggagaaacctggagctgaatatccaggcgacggttcagactctgacagaaac
agtcctgatgaccagctgcaggtccagaagatgagaagcagcccgtacagcctttcaccc
acagcagcaggcagcaaggtaaagagcgaagagagctcagagataacacacagcgccgcc
gctgctgcagccgctgctcctcctgctgctccaccctcccaacaacaacaacagcaacag
cagcaggctcagcatcaccacacacagctgatgctcgccagcagtcagctggcagggctc
gccgctctcctcccggcccagcagcagctgctcctccagcaggctcaggctcagctgctg
gcggccgccgtgcagcagtccaacgccgctcacgccgccgcccacgccgccgcgcagcaa
caagccaatcagcagcagcaacagccaaccaaacaggagcagccggtccaagctccgcct
ccacagctggcgctgtcacagcccatccagctgaccgcgcaggacatccagcagctgctg
cagctccagcagctggttctgatgccgggtcatcccctccagtcgccggcccagttcctc
ctgtcccagcctgcacaggcgcagcagccgcagcagggtttgctctcaacagcaaatctg
atccagctacctcagcaaagcgcaggaggccttctcacaagtccgcctcgcatgggactc
caagcacagagggagaagagcagtgacgcaggaagcagcagcagcagctcagcctctgta
gccgccagcggaagcagcagcgctgtaacgtctgtcggagccagctctgcatccagcagc
gccatggcctcctccttgacctctggcttgaatcccggcggtcagacggctcaaatgagc
gaagaaccgagcgacctggaggagctggagcagttcgcccgaaccttcaagcagcggcgc
attaaactcggattcacacagggtgacgttggcgtggcgatggggaaactgtacggaaat
gacttcagccagaccaccatctctcgcttcgaagcgttaaacctgagctttaagaacatg
tgcaagctgaagccactgctggagaagtggttgagtgatgcagaaacgatggcggtggac
agcatgctgcccagtccatcctccatctcctcccccatgctgggcatcgaaggacttccc
ggccgacgcagaaagaaacgcaccagcatcgagacgaacgtacgagtggtgctggagcgc
aacttcagcacgaaccaaaagccgacgtcggaggagatcctgctgatggcggagcagctc
aacatggagaaggaggtgatccgtgtctggttctgcaaccgccggcagaaggagaagcgc
atcaatccgtcgagcagcagcaccccacccctgcccagccagacctcgcctgtcgtgacg
cacaaagtccactgctacagcccccacatgatatcgagtcagagtctgtcccaggtcacc
accagcctcagcacaacaggagccagctcttcaccctcagcttcctgccctatgaccccg
gtcagctcggtggccatgtcgtcgtctgccactcctcctcctcctcacagcacagccagc
ccggctccttccagcctcggcacggccgggctcgccaccgggaacacaatgatgggagta
agcacagggatgaaccaggccctcattggcagcaatcctctggctaccatgcaagcgctg
gcagccagcggcgggcagcttcccatctccagcctggagggggcgccgggccacatgttt
ctgagtggacatggcggtcactccgtccccgcctccctgcgcccctctctcttcctgaac
cgccccggcctcctgccgatggtgacctgctccacgccgacttcctccatgcccatgggg
ctggtcagctgcggccccagaccttcgtattgccaatcttcgcccagcggcaccagcaac
ctcatgagccccacttcctgcccagaggagtctgtgtctccctgttcaagccccgcctct
ttctgctccttcagcgaagcttcaccgccgccactgggaggagccatggccgagtga
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