Xiphophorus couchianus (Monterrey platyfish): 114155489
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Entry
114155489 CDS
T05908
Name
(RefSeq) replication protein A 32 kDa subunit-like
KO
K10739
replication factor A2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030
DNA replication
xco03420
Nucleotide excision repair
xco03430
Mismatch repair
xco03440
Homologous recombination
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114155489
03420 Nucleotide excision repair
114155489
03430 Mismatch repair
114155489
03440 Homologous recombination
114155489
03460 Fanconi anemia pathway
114155489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114155489
03400 DNA repair and recombination proteins [BR:
xco03400
]
114155489
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114155489
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114155489
MMR (mismatch excision repair)
114155489
DSBR (double strand breaks repair)
HR (homologous recombination)
114155489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
RMI2
tRNA_anti-codon
CofD
Motif
Other DBs
NCBI-GeneID:
114155489
NCBI-ProteinID:
XP_027891200
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All DBs
Position
13:28582412..28587787
Genome browser
AA seq
247 aa
AA seq
DB search
MWNQGCSQSSGETLNHKATSSKKAHLEIFPCTVSQLLAAPQLCKDSFTICDCELKQVSVV
GVIRGFALFETNVQYTVDDMTGPPLNVKLWVNMEDSALTTVASPGMYVKVIGSLRSYSEQ
RSLLAMNVRRVKDLNEISSHMLEVVQAHMQVFRKVFDVNMNLTVAPQPDWSSATRPRGVL
PNGLSTVQGQVLHQIQVFSVHNDGINFHDLTRNLDYISIGDIRSSLAFLASEGHIFSTID
EHHFKAV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcaaggctgcagtcagtccagtggtgaaaccttgaaccacaaagctacatca
tcaaagaaagcacaccttgagattttcccctgcaccgtctcccagctgctggctgctcct
caactctgcaaagattccttcactatctgtgactgtgagctcaaacaggtttctgttgtt
ggagtcatcagaggatttgctctttttgagaccaatgtccagtacaccgtggacgacatg
accggtccacccctgaatgtgaagctatgggttaacatggaggattctgcactgacgact
gtagcttctccaggaatgtatgtgaaggtgattggaagcctgcgcagctacagtgaacag
aggtcgctactggcaatgaatgtccgacgtgtaaaggacctgaatgagatcagctcccac
atgttggaggtggtacaagctcatatgcaggttttcagaaaggtctttgatgtgaacatg
aacctcactgtggcgccgcaacctgactggagcagtgcgacgcgtcctcgaggcgtttta
ccaaatggtttgtctacagtccagggccaggtgttgcatcaaatccaagtgttctctgtc
cataatgatggcatcaatttccatgacctgacaagaaacctggactacattagcattgga
gacattagatcttccttggctttccttgcaagtgaaggtcacatcttttccaccattgat
gagcatcatttcaaggcagtataa
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