Xiphophorus couchianus (Monterrey platyfish): 114155526
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Entry
114155526 CDS
T05908
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114155526 (tdp2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
114155526 (tdp2)
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
Motif
Other DBs
NCBI-GeneID:
114155526
NCBI-ProteinID:
XP_027891250
UniProt:
A0A3B5MTR5
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Position
13:complement(12533962..12538137)
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AA seq
359 aa
AA seq
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MASTSNSESPSVSDLEKSRSGLCEEFATITGTDSAVAQCYLAENDWEMERAVNSFFEADM
ERIFEEDFQESDCVPPKKKQKVEEEPSKECIDLTGDSPVARKPPDEDDGKLSLISWNVDG
LDTDNLAERARGLCSYLVLYTPDVVFLQELIPPYVQYLKKRAVSYLIIEGGEEAYFTGMM
LKKSRVKFLESEIVTYPTTQMMRNLLVAQVTFKGQKLCLMTSHLESCKGHAQERMKQLHT
VMQRMKDAPDDVTVLFGGDTNLRDTEVAKVGLPSGVCDVWERLGKQEHCRYTWDTKANNN
KAVPFVSRCRFDRIYLRPASKEGVPRLAPDHMALIGLEKLDCGRYTSDHWGLYCSFTAG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacatcaaactcggagtccccgtctgtgtctgacttggaaaaaagcaggagt
ggactttgcgaggagttcgccactataacggggactgatagcgccgtggctcaatgctac
ctggctgaaaatgactgggagatggagagagctgtaaactcattctttgaggcagacatg
gagagaatatttgaggaagactttcaggagagtgactgcgtccctccgaaaaaaaagcaa
aaagtcgaggaagaaccttcaaaggagtgcatcgatttgaccggagacagtccagttgca
cgaaagccaccagatgaagatgatggcaaactgtccctgatctcctggaacgtggatgga
ctagacacggacaacctggcagagcgtgccagaggcctctgctcctacttagtgctatac
acccctgatgtggtattcctgcaggaactcattccaccttatgttcaatacttgaagaaa
cgggctgtcagctacctcatcattgaaggtggtgaagaagcttacttcacaggaatgatg
ctaaagaaatccagagtaaaattcttggagagtgagatcgtaacttatcccaccacacag
atgatgaggaatctacttgtagctcaggtgacgttcaaaggtcagaagttgtgcctgatg
acttcccaccttgaaagctgtaaaggccacgctcaggagcggatgaagcagctgcacacg
gtgatgcagaggatgaaagacgctcctgatgatgtcaccgtcctgtttggaggggacacg
aatctgagggacaccgaggtagccaaagtgggcctgccgtctggcgtctgtgacgtgtgg
gagcgactgggcaagcaggagcactgccgctacacatgggacaccaaggccaacaacaac
aaggccgttcccttcgtcagccgctgccgcttcgatcgcatctacctccggccagcctcc
aaggaaggagtaccacgtctggccccggatcacatggccctaatcggactggagaagctg
gactgtggccgctacacaagcgaccactggggcctttactgcagcttcaccgcagggtag
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