Xiphophorus couchianus (Monterrey platyfish): 114155599
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Entry
114155599 CDS
T05908
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114155599
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114155599
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
114155599
NCBI-ProteinID:
XP_027891362
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Position
13:3776815..3794631
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AA seq
519 aa
AA seq
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MRQWSVPTATLRAEPLPGCLSVSPPPSDPSMETCEVEPRYTIEQIDLLQRLRLSGMTKPQ
ILHALESLERLDPDHRPPPPPLPPRCDSHPAPPSNATPAAAPAPSSSSSSSSSSLSLASA
TTQTSGLEGAALSPSNSYEASPPPLYPPSVVVQRAFSYDMMGEEEWDLEEKVEEYMRRDS
NLVKEEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERN
NPGLRWSESQHSVSPMARARAGDRDGTVAGASGTLPNIFPNPNTNLMPNHSPSWSRQREL
LVHLLPWYTAAAAAAAQPGATLSMRSLVKEEPDWRTGIIASDRAGIVGGPLRLRRGSRFT
WRKECQSIMESFFMENQYPDEAKREEIASACNSVIQKPGCKLSEFERVTALKVYNWFANR
RKEMKRRANIEAAILESHGIEVPSPSCHSNGEEGELQEFVDQVNHRFSEQEDATSQKIVD
QQDGSALITGEAMAAPLSPDPQGAEQKDRDSKRESVDEE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtccgtccccactgcgacccttcgcgctgagccactcccggggtgcctg
tccgtgtcaccccctccgtctgaccccagtatggagacgtgcgaggtggagccgcgctac
accatcgagcagatcgacctcctgcagcgcctgcgcctctccggcatgaccaaaccccag
atcctccacgcactggagtccctggagaggctggacccagaccaccgcccaccgccaccc
ccgttgccgccacgctgcgactcccacccggccccgcccagcaacgccacacccgccgct
gcccccgccccgtcctcgtcgtcctcctcgtcatcctcctcgctctctctggcctcggcc
accacccagacctcgggcctcgagggtgcggcactgtcgcccagcaacagctacgaggct
tcgccgccacccttgtacccccccagcgtggtggtgcagcgggcgttcagctacgatatg
atgggcgaggaggagtgggacctggaggagaaggtggaggagtacatgagaagagacagc
aacctggtgaaagaggagatcaagacgttcctgaacaaccggcggatctctcaggccatc
gtaggccaggtcacaggcatcagccagagctacatctcccagtggctgctgcagcaaggc
ctggagatgagcgactccaagcgcagagccttctaccgctggtacctgctggagaggaac
aacccaggcctgaggtggagtgaaagccagcacagcgtgagtcccatggccagggccagg
gcaggggacagagatgggacggtagcaggggcgagcggcaccctccccaacatcttcccc
aaccccaacaccaacctgatgcccaaccacagcccgtcctggagcaggcagagagagctg
ctggtgcacctgctgccgtggtacacagccgccgcagcggctgccgcccagccaggtgcg
accttgtcgatgcgctctttggtgaaggaggaacccgactggagaacgggtatcatcgcc
agcgacagagcggggattgtaggcggtcctctgaggctgcgcagaggaagcaggttcacc
tggaggaaggagtgccagtccatcatggagagcttcttcatggagaatcagtatccagat
gaggcgaagcgcgaggagatcgccagcgcctgtaattctgtcatccagaaaccaggctgt
aagctgtcagagtttgagcgggtgacggcgttgaaggtgtacaactggttcgccaaccgt
cggaaggagatgaagagaagagcaaacatagaagccgccatcttggaaagccatgggatc
gaggtgccaagtccgagctgccactcgaacggcgaagagggagagctgcaagagtttgta
gatcaagtgaaccatcggttctcagagcaggaggacgccacttcccagaaaatcgttgac
caacaagatggctccgcgctgatcactggggaggcgatggcggccccgctgagccccgac
cctcagggggcagaacagaaggacagggattcaaaaagggagtctgtggacgaggagtga
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