KEGG   Xiphophorus couchianus (Monterrey platyfish): 114155653
Entry
114155653         CDS       T05908                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03030  DNA replication
xco03420  Nucleotide excision repair
xco03430  Mismatch repair
xco03440  Homologous recombination
xco03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114155653 (rpa3)
   03420 Nucleotide excision repair
    114155653 (rpa3)
   03430 Mismatch repair
    114155653 (rpa3)
   03440 Homologous recombination
    114155653 (rpa3)
   03460 Fanconi anemia pathway
    114155653 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xco03032]
    114155653 (rpa3)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114155653 (rpa3)
DNA replication proteins [BR:xco03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    114155653 (rpa3)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     114155653 (rpa3)
   MMR (mismatch excision repair)
     114155653 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     114155653 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 114155653
NCBI-ProteinID: XP_027891444
LinkDB
Position
13:27794257..27795444
AA seq 122 aa
MAGILDVPKPRINCSMLSQFISRAICFVGRVEKVHPTGKMFTVMDGEGKTATVELNEPLE
EELSGIVEVIGMVSNKGEIMASTYNLLREDKGIPFDLELYNEALKVIHDFPQHYPFQVAA
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaggtatactggacgttccaaaaccgagaataaactgctccatgctttcgcagttc
atcagccgagccatctgcttcgtcgggcgtgttgaaaaggttcatcccactgggaaaatg
ttcactgtgatggatggagagggaaagactgcaacagtggaactaaacgaacctcttgaa
gaggagctgagtggaattgtggaggttataggaatggtgtcgaacaaaggagaaataatg
gccagcacatacaacctgctgagagaggacaaggggattccctttgatttagagctgtac
aacgaagcactgaaggtcatccatgacttcccccagcactaccctttccaggtggctgca
agcggatga

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